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Merge pull request #1350 from nf-core/bump_bedtools_mem
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Reduce resource usage for sort process in bedtools/genomecov
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pinin4fjords authored Aug 7, 2024
2 parents 809f060 + add81e8 commit 6a508f0
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1 change: 1 addition & 0 deletions CHANGELOG.md
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Expand Up @@ -106,6 +106,7 @@ Thank you to everyone else that has contributed by reporting bugs, enhancements
- [PR #1341](https://github.com/nf-core/rnaseq/pull/1341) - Add rename in the MultiQC report for samples without techreps
- [PR #1342](https://github.com/nf-core/rnaseq/pull/1342) - Factor out preprocessing
- [PR #1345](https://github.com/nf-core/rnaseq/pull/1345) - Fix preprocessing call
- [PR #1350](https://github.com/nf-core/rnaseq/pull/1350) - Reduce resource usage for sort process in bedtools/genomecov

### Parameters

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2 changes: 1 addition & 1 deletion modules.json
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Expand Up @@ -12,7 +12,7 @@
},
"bedtools/genomecov": {
"branch": "master",
"git_sha": "81b90194ce9911dbd55bba2c65c6919f6677abc4",
"git_sha": "9ba6b02bbcb322ff4265cc51fca0ee5d8420b929",
"installed_by": ["modules"]
},
"cat/fastq": {
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11 changes: 7 additions & 4 deletions modules/nf-core/bedtools/genomecov/main.nf

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83 changes: 70 additions & 13 deletions modules/nf-core/bedtools/genomecov/tests/main.nf.test

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131 changes: 118 additions & 13 deletions modules/nf-core/bedtools/genomecov/tests/main.nf.test.snap

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