@aanil (Anandashankar Anil) correctly pointed out that some MultiQC c…

…onfiguration parameters used in the config were deprecated.
nf-core · Jul 2, 2024 · c005701 · c005701
1 parent aecde62
commit c005701
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Showing 3 changed files with 10 additions and 15 deletions.
diff --git a/modules/nf-core/dupradar/templates/dupradar.r b/modules/nf-core/dupradar/templates/dupradar.r
diff --git a/workflows/rnaseq/assets/multiqc/deseq2_clustering_header.txt b/workflows/rnaseq/assets/multiqc/deseq2_clustering_header.txt
@@ -8,5 +8,5 @@
 #anchor: 'deseq2_clustering'
 #pconfig:
 #    title: 'DESeq2: Heatmap of the sample-to-sample distances'
-#    xlab: True
-#    reverseColors: True
+#    xlog: True
+#    reverse_colors: True
diff --git a/workflows/rnaseq/assets/multiqc/multiqc_config.yml b/workflows/rnaseq/assets/multiqc/multiqc_config.yml
@@ -1,13 +1,14 @@
 report_comment: >
   This report has been generated by the <a href="https://github.com/nf-core/rnaseq/tree/dev" target="_blank">nf-core/rnaseq</a> analysis pipeline. For information about how to interpret these results, please see the <a href="https://nf-co.re/rnaseq/dev/docs/output" target="_blank">documentation</a>.
 report_section_order:
-  "nf-core-rnaseq-methods-description":
+  "nf-core-rnaseq-methods-description-module":
     order: -1000
-  software_versions:
+  "software_versions-module":
     order: -1001
-  "nf-core-rnaseq-summary":
+  "nf-core-rnaseq-summary-module":
     order: -1002
 
+
 export_plots: true
 disable_version_detection: true