-
Notifications
You must be signed in to change notification settings - Fork 701
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
RC 3.16.0 #1395
Commits on Jul 30, 2024
-
Configuration menu - View commit details
-
Copy full SHA for 3e0793f - Browse repository at this point
Copy the full SHA 3e0793fView commit details -
Configuration menu - View commit details
-
Copy full SHA for a7281e5 - Browse repository at this point
Copy the full SHA a7281e5View commit details -
Configuration menu - View commit details
-
Copy full SHA for 734919e - Browse repository at this point
Copy the full SHA 734919eView commit details
Commits on Jul 31, 2024
-
Configuration menu - View commit details
-
Copy full SHA for 8695f50 - Browse repository at this point
Copy the full SHA 8695f50View commit details -
Configuration menu - View commit details
-
Copy full SHA for 44ba282 - Browse repository at this point
Copy the full SHA 44ba282View commit details
Commits on Aug 5, 2024
-
Configuration menu - View commit details
-
Copy full SHA for 3657e3e - Browse repository at this point
Copy the full SHA 3657e3eView commit details -
Configuration menu - View commit details
-
Copy full SHA for 7ab90f6 - Browse repository at this point
Copy the full SHA 7ab90f6View commit details -
Configuration menu - View commit details
-
Copy full SHA for 39cfdef - Browse repository at this point
Copy the full SHA 39cfdefView commit details -
Configuration menu - View commit details
-
Copy full SHA for 2e9c243 - Browse repository at this point
Copy the full SHA 2e9c243View commit details
Commits on Aug 6, 2024
-
Configuration menu - View commit details
-
Copy full SHA for 03314c9 - Browse repository at this point
Copy the full SHA 03314c9View commit details
Commits on Aug 7, 2024
-
Configuration menu - View commit details
-
Copy full SHA for 7913cbc - Browse repository at this point
Copy the full SHA 7913cbcView commit details -
Configuration menu - View commit details
-
Copy full SHA for 063b4ac - Browse repository at this point
Copy the full SHA 063b4acView commit details -
Configuration menu - View commit details
-
Copy full SHA for 075bca8 - Browse repository at this point
Copy the full SHA 075bca8View commit details -
Configuration menu - View commit details
-
Copy full SHA for a0a225c - Browse repository at this point
Copy the full SHA a0a225cView commit details -
Configuration menu - View commit details
-
Copy full SHA for bd4ea1c - Browse repository at this point
Copy the full SHA bd4ea1cView commit details -
Configuration menu - View commit details
-
Copy full SHA for 7789827 - Browse repository at this point
Copy the full SHA 7789827View commit details -
Configuration menu - View commit details
-
Copy full SHA for 336a7b0 - Browse repository at this point
Copy the full SHA 336a7b0View commit details
Commits on Aug 9, 2024
-
Configuration menu - View commit details
-
Copy full SHA for a1e1d99 - Browse repository at this point
Copy the full SHA a1e1d99View commit details -
Configuration menu - View commit details
-
Copy full SHA for 33c9483 - Browse repository at this point
Copy the full SHA 33c9483View commit details
Commits on Aug 15, 2024
-
Configuration menu - View commit details
-
Copy full SHA for 102152e - Browse repository at this point
Copy the full SHA 102152eView commit details -
Configuration menu - View commit details
-
Copy full SHA for 6dd7521 - Browse repository at this point
Copy the full SHA 6dd7521View commit details -
Configuration menu - View commit details
-
Copy full SHA for fdd85ad - Browse repository at this point
Copy the full SHA fdd85adView commit details -
Configuration menu - View commit details
-
Copy full SHA for c0099d4 - Browse repository at this point
Copy the full SHA c0099d4View commit details -
Configuration menu - View commit details
-
Copy full SHA for c25aa50 - Browse repository at this point
Copy the full SHA c25aa50View commit details
Commits on Aug 16, 2024
-
Configuration menu - View commit details
-
Copy full SHA for 0063c2d - Browse repository at this point
Copy the full SHA 0063c2dView commit details -
Configuration menu - View commit details
-
Copy full SHA for 53f46b2 - Browse repository at this point
Copy the full SHA 53f46b2View commit details
Commits on Aug 18, 2024
-
Configuration menu - View commit details
-
Copy full SHA for 2dc5746 - Browse repository at this point
Copy the full SHA 2dc5746View commit details
Commits on Aug 19, 2024
-
Configuration menu - View commit details
-
Copy full SHA for 2a322c4 - Browse repository at this point
Copy the full SHA 2a322c4View commit details -
Co-authored-by: Matthias Zepper <[email protected]>
Configuration menu - View commit details
-
Copy full SHA for 75a10f7 - Browse repository at this point
Copy the full SHA 75a10f7View commit details -
Configuration menu - View commit details
-
Copy full SHA for cfc8945 - Browse repository at this point
Copy the full SHA cfc8945View commit details
Commits on Sep 6, 2024
-
Configuration menu - View commit details
-
Copy full SHA for 7b6915c - Browse repository at this point
Copy the full SHA 7b6915cView commit details -
Configuration menu - View commit details
-
Copy full SHA for 41bbfdf - Browse repository at this point
Copy the full SHA 41bbfdfView commit details
Commits on Sep 10, 2024
-
Configuration menu - View commit details
-
Copy full SHA for 69f2d0a - Browse repository at this point
Copy the full SHA 69f2d0aView commit details -
Configuration menu - View commit details
-
Copy full SHA for 68b9a21 - Browse repository at this point
Copy the full SHA 68b9a21View commit details -
Configuration menu - View commit details
-
Copy full SHA for 5d20e28 - Browse repository at this point
Copy the full SHA 5d20e28View commit details -
Configuration menu - View commit details
-
Copy full SHA for b4332d9 - Browse repository at this point
Copy the full SHA b4332d9View commit details
Commits on Sep 13, 2024
-
Configuration menu - View commit details
-
Copy full SHA for eada63d - Browse repository at this point
Copy the full SHA eada63dView commit details -
Configuration menu - View commit details
-
Copy full SHA for e567889 - Browse repository at this point
Copy the full SHA e567889View commit details -
Configuration menu - View commit details
-
Copy full SHA for c652e79 - Browse repository at this point
Copy the full SHA c652e79View commit details -
Configuration menu - View commit details
-
Copy full SHA for f1d624e - Browse repository at this point
Copy the full SHA f1d624eView commit details -
Configuration menu - View commit details
-
Copy full SHA for d145a1b - Browse repository at this point
Copy the full SHA d145a1bView commit details -
Configuration menu - View commit details
-
Copy full SHA for 6096641 - Browse repository at this point
Copy the full SHA 6096641View commit details -
Configuration menu - View commit details
-
Copy full SHA for 29af996 - Browse repository at this point
Copy the full SHA 29af996View commit details -
Configuration menu - View commit details
-
Copy full SHA for caa80e6 - Browse repository at this point
Copy the full SHA caa80e6View commit details -
Configuration menu - View commit details
-
Copy full SHA for 03b6501 - Browse repository at this point
Copy the full SHA 03b6501View commit details
Commits on Sep 14, 2024
-
Configuration menu - View commit details
-
Copy full SHA for 4dc9fb8 - Browse repository at this point
Copy the full SHA 4dc9fb8View commit details -
Configuration menu - View commit details
-
Copy full SHA for 2be93d8 - Browse repository at this point
Copy the full SHA 2be93d8View commit details
Commits on Sep 17, 2024
-
Configuration menu - View commit details
-
Copy full SHA for 6904250 - Browse repository at this point
Copy the full SHA 6904250View commit details -
Configuration menu - View commit details
-
Copy full SHA for 0ae5f13 - Browse repository at this point
Copy the full SHA 0ae5f13View commit details -
Configuration menu - View commit details
-
Copy full SHA for 96c415d - Browse repository at this point
Copy the full SHA 96c415dView commit details -
Configuration menu - View commit details
-
Copy full SHA for 6def003 - Browse repository at this point
Copy the full SHA 6def003View commit details -
Configuration menu - View commit details
-
Copy full SHA for ca3a646 - Browse repository at this point
Copy the full SHA ca3a646View commit details -
Configuration menu - View commit details
-
Copy full SHA for 85b320b - Browse repository at this point
Copy the full SHA 85b320bView commit details -
Co-authored-by: Jonathan Manning <[email protected]>
Configuration menu - View commit details
-
Copy full SHA for 6ea73a6 - Browse repository at this point
Copy the full SHA 6ea73a6View commit details -
Merge pull request #1386 from maxulysse/3.16.0dev
nf-core pipelines bump-version 3.16.0dev
Configuration menu - View commit details
-
Copy full SHA for 0b4125d - Browse repository at this point
Copy the full SHA 0b4125dView commit details -
Configuration menu - View commit details
-
Copy full SHA for fb6c429 - Browse repository at this point
Copy the full SHA fb6c429View commit details -
Configuration menu - View commit details
-
Copy full SHA for 17054a4 - Browse repository at this point
Copy the full SHA 17054a4View commit details -
Configuration menu - View commit details
-
Copy full SHA for 5b41e56 - Browse repository at this point
Copy the full SHA 5b41e56View commit details
Commits on Sep 18, 2024
-
Configuration menu - View commit details
-
Copy full SHA for 6aee372 - Browse repository at this point
Copy the full SHA 6aee372View commit details -
Configuration menu - View commit details
-
Copy full SHA for 4d143b5 - Browse repository at this point
Copy the full SHA 4d143b5View commit details -
Configuration menu - View commit details
-
Copy full SHA for a3e0328 - Browse repository at this point
Copy the full SHA a3e0328View commit details -
Configuration menu - View commit details
-
Copy full SHA for 4811e91 - Browse repository at this point
Copy the full SHA 4811e91View commit details -
Configuration menu - View commit details
-
Copy full SHA for 30d629b - Browse repository at this point
Copy the full SHA 30d629bView commit details -
Configuration menu - View commit details
-
Copy full SHA for c26abe5 - Browse repository at this point
Copy the full SHA c26abe5View commit details -
Configuration menu - View commit details
-
Copy full SHA for 7906611 - Browse repository at this point
Copy the full SHA 7906611View commit details -
Configuration menu - View commit details
-
Copy full SHA for c561922 - Browse repository at this point
Copy the full SHA c561922View commit details
Commits on Sep 19, 2024
-
Configuration menu - View commit details
-
Copy full SHA for 77e9cc1 - Browse repository at this point
Copy the full SHA 77e9cc1View commit details -
Configuration menu - View commit details
-
Copy full SHA for d979788 - Browse repository at this point
Copy the full SHA d979788View commit details -
Configuration menu - View commit details
-
Copy full SHA for 742bfa1 - Browse repository at this point
Copy the full SHA 742bfa1View commit details -
Apply suggestions from code review
Co-authored-by: Jonathan Manning <[email protected]>
Configuration menu - View commit details
-
Copy full SHA for c9e8d0f - Browse repository at this point
Copy the full SHA c9e8d0fView commit details -
Configuration menu - View commit details
-
Copy full SHA for 26f3993 - Browse repository at this point
Copy the full SHA 26f3993View commit details -
Configuration menu - View commit details
-
Copy full SHA for e44a03c - Browse repository at this point
Copy the full SHA e44a03cView commit details -
Configuration menu - View commit details
-
Copy full SHA for ed2cf1f - Browse repository at this point
Copy the full SHA ed2cf1fView commit details -
Configuration menu - View commit details
-
Copy full SHA for 9234922 - Browse repository at this point
Copy the full SHA 9234922View commit details -
Configuration menu - View commit details
-
Copy full SHA for 26737a7 - Browse repository at this point
Copy the full SHA 26737a7View commit details -
Configuration menu - View commit details
-
Copy full SHA for 3172eaa - Browse repository at this point
Copy the full SHA 3172eaaView commit details -
Configuration menu - View commit details
-
Copy full SHA for bc193df - Browse repository at this point
Copy the full SHA bc193dfView commit details -
Configuration menu - View commit details
-
Copy full SHA for fd9b449 - Browse repository at this point
Copy the full SHA fd9b449View commit details -
Configuration menu - View commit details
-
Copy full SHA for 41bcd9c - Browse repository at this point
Copy the full SHA 41bcd9cView commit details -
Configuration menu - View commit details
-
Copy full SHA for 3e0b3e9 - Browse repository at this point
Copy the full SHA 3e0b3e9View commit details -
Configuration menu - View commit details
-
Copy full SHA for 02f65ab - Browse repository at this point
Copy the full SHA 02f65abView commit details -
Merge pull request #1388 from egreenberg7/dev
New module: Kraken2/Bracken on Unaligned Sequences for Contamination Detection
Configuration menu - View commit details
-
Copy full SHA for da7b999 - Browse repository at this point
Copy the full SHA da7b999View commit details -
Configuration menu - View commit details
-
Copy full SHA for a6a3107 - Browse repository at this point
Copy the full SHA a6a3107View commit details
Commits on Sep 20, 2024
-
Configuration menu - View commit details
-
Copy full SHA for dc788b4 - Browse repository at this point
Copy the full SHA dc788b4View commit details -
Configuration menu - View commit details
-
Copy full SHA for 8550e6d - Browse repository at this point
Copy the full SHA 8550e6dView commit details -
Configuration menu - View commit details
-
Copy full SHA for 5a62a0f - Browse repository at this point
Copy the full SHA 5a62a0fView commit details -
Configuration menu - View commit details
-
Copy full SHA for 41b44b0 - Browse repository at this point
Copy the full SHA 41b44b0View commit details -
Configuration menu - View commit details
-
Copy full SHA for 82c833d - Browse repository at this point
Copy the full SHA 82c833dView commit details -
Configuration menu - View commit details
-
Copy full SHA for f5f055e - Browse repository at this point
Copy the full SHA f5f055eView commit details -
Merge pull request #1376 from nf-core/pditommaso-patch-1
Fix invalid named parameter syntax
Configuration menu - View commit details
-
Copy full SHA for fadc4ea - Browse repository at this point
Copy the full SHA fadc4eaView commit details -
Configuration menu - View commit details
-
Copy full SHA for 577c3ab - Browse repository at this point
Copy the full SHA 577c3abView commit details -
Configuration menu - View commit details
-
Copy full SHA for 9bc5d85 - Browse repository at this point
Copy the full SHA 9bc5d85View commit details -
Merge pull request #1389 from maxulysse/update_animate_map
update animated subway map
Configuration menu - View commit details
-
Copy full SHA for e6e85ef - Browse repository at this point
Copy the full SHA e6e85efView commit details -
Configuration menu - View commit details
-
Copy full SHA for 712342a - Browse repository at this point
Copy the full SHA 712342aView commit details -
Configuration menu - View commit details
-
Copy full SHA for 134fe31 - Browse repository at this point
Copy the full SHA 134fe31View commit details
Commits on Sep 23, 2024
-
Configuration menu - View commit details
-
Copy full SHA for 5bd3d87 - Browse repository at this point
Copy the full SHA 5bd3d87View commit details -
Configuration menu - View commit details
-
Copy full SHA for 0df0995 - Browse repository at this point
Copy the full SHA 0df0995View commit details -
Configuration menu - View commit details
-
Copy full SHA for b21e93c - Browse repository at this point
Copy the full SHA b21e93cView commit details -
Configuration menu - View commit details
-
Copy full SHA for 8dc2d34 - Browse repository at this point
Copy the full SHA 8dc2d34View commit details
Commits on Sep 30, 2024
-
Configuration menu - View commit details
-
Copy full SHA for f6522c8 - Browse repository at this point
Copy the full SHA f6522c8View commit details -
Configuration menu - View commit details
-
Copy full SHA for 5c61ed3 - Browse repository at this point
Copy the full SHA 5c61ed3View commit details -
Configuration menu - View commit details
-
Copy full SHA for 894a770 - Browse repository at this point
Copy the full SHA 894a770View commit details -
Merge pull request #1393 from maxulysse/patch_registry
patch bedtools/genomecov to use quay.io to solve issue with nf-core download
Configuration menu - View commit details
-
Copy full SHA for fcbfa1b - Browse repository at this point
Copy the full SHA fcbfa1bView commit details -
Configuration menu - View commit details
-
Copy full SHA for 30483c7 - Browse repository at this point
Copy the full SHA 30483c7View commit details -
Configuration menu - View commit details
-
Copy full SHA for 1424156 - Browse repository at this point
Copy the full SHA 1424156View commit details
Commits on Oct 1, 2024
-
Configuration menu - View commit details
-
Copy full SHA for 5d79bdc - Browse repository at this point
Copy the full SHA 5d79bdcView commit details -
Configuration menu - View commit details
-
Copy full SHA for 07ba1b9 - Browse repository at this point
Copy the full SHA 07ba1b9View commit details -
Configuration menu - View commit details
-
Copy full SHA for 00a87fc - Browse repository at this point
Copy the full SHA 00a87fcView commit details -
Configuration menu - View commit details
-
Copy full SHA for a83ce56 - Browse repository at this point
Copy the full SHA a83ce56View commit details -
Configuration menu - View commit details
-
Copy full SHA for b80c6c5 - Browse repository at this point
Copy the full SHA b80c6c5View commit details -
Configuration menu - View commit details
-
Copy full SHA for 7d14c74 - Browse repository at this point
Copy the full SHA 7d14c74View commit details -
Configuration menu - View commit details
-
Copy full SHA for 2b856b7 - Browse repository at this point
Copy the full SHA 2b856b7View commit details -
Configuration menu - View commit details
-
Copy full SHA for 1d50d31 - Browse repository at this point
Copy the full SHA 1d50d31View commit details -
Configuration menu - View commit details
-
Copy full SHA for d19cea4 - Browse repository at this point
Copy the full SHA d19cea4View commit details
Commits on Oct 2, 2024
-
Configuration menu - View commit details
-
Copy full SHA for 1d35e2a - Browse repository at this point
Copy the full SHA 1d35e2aView commit details -
Merge pull request #1379 from maxulysse/better_snapshots
Improve pipeline level snapshots
Configuration menu - View commit details
-
Copy full SHA for 07197c5 - Browse repository at this point
Copy the full SHA 07197c5View commit details -
Configuration menu - View commit details
-
Copy full SHA for a5d636a - Browse repository at this point
Copy the full SHA a5d636aView commit details -
Configuration menu - View commit details
-
Copy full SHA for 73c8101 - Browse repository at this point
Copy the full SHA 73c8101View commit details -
Merge pull request #1394 from maxulysse/prepare_3.15.2
prepare RC 3.16.0
Configuration menu - View commit details
-
Copy full SHA for 2867938 - Browse repository at this point
Copy the full SHA 2867938View commit details -
Configuration menu - View commit details
-
Copy full SHA for f901e4f - Browse repository at this point
Copy the full SHA f901e4fView commit details -
Apply suggestions from code review
Co-authored-by: James A. Fellows Yates <[email protected]>
Configuration menu - View commit details
-
Copy full SHA for 00a0857 - Browse repository at this point
Copy the full SHA 00a0857View commit details