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Important! Template update for nf-core/tools v3.0.1 #3021

Important! Template update for nf-core/tools v3.0.1

Important! Template update for nf-core/tools v3.0.1 #3021

GitHub Actions / JUnit Test Report failed Oct 9, 2024 in 0s

2 tests run, 0 passed, 0 skipped, 2 failed.

Annotations

Check failure on line 1 in Params: --pseudo_aligner kallisto --skip_qc --skip_alignment

See this annotation in the file changed.

@github-actions github-actions / JUnit Test Report

Params: --pseudo_aligner kallisto --skip_qc --skip_alignment

Assertion failed: 

2 of 2 assertions failed
Raw output
Nextflow stdout:

N E X T F L O W  ~  version 24.04.2
Launching `/home/runner/work/rnaseq/rnaseq/tests/../main.nf` [magical_cuvier] DSL2 - revision: b67fa8fbe5
Downloading plugin [email protected]
ERROR ~ Extension 'fromList' it isn't defined by plugin nf-schema

 -- Check script '/home/runner/work/rnaseq/rnaseq/./workflows/rnaseq/main.nf' at line: 53 or see '/home/runner/work/rnaseq/rnaseq/~/tests/3bdf2943960b42549e1eb2f05f2109d/meta/nextflow.log' file for more details
Nextflow stderr:

Nextflow 24.04.4 is available - Please consider updating your version to it

Check failure on line 1 in Params: --pseudo_aligner kallisto --skip_qc --skip_alignment - stub

See this annotation in the file changed.

@github-actions github-actions / JUnit Test Report

Params: --pseudo_aligner kallisto --skip_qc --skip_alignment - stub

Assertion failed: 

2 of 2 assertions failed
Raw output
Nextflow stdout:

N E X T F L O W  ~  version 24.04.2
Launching `/home/runner/work/rnaseq/rnaseq/tests/../main.nf` [marvelous_lagrange] DSL2 - revision: b67fa8fbe5
ERROR ~ Extension 'fromList' it isn't defined by plugin nf-schema

 -- Check script '/home/runner/work/rnaseq/rnaseq/./workflows/rnaseq/main.nf' at line: 53 or see '/home/runner/work/rnaseq/rnaseq/~/tests/54655b7600b646af862a2f183d5309ad/meta/nextflow.log' file for more details
Nextflow stderr:

Nextflow 24.04.4 is available - Please consider updating your version to it