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Remove unnecessary quay.io/... container address
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fasterius committed Jul 3, 2023
1 parent df183e6 commit 652ee14
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion modules/local/st_read_data.nf
Original file line number Diff line number Diff line change
Expand Up @@ -9,7 +9,7 @@ process ST_READ_DATA {
conda "conda-forge::scanpy=1.7.2 conda-forge::matplotlib=3.6.3 conda-forge::pandas=1.5.3"
container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
'https://depot.galaxyproject.org/singularity/scanpy:1.7.2--pyhdfd78af_0' :
'quay.io/biocontainers/scanpy:1.7.2--pyhdfd78af_0' }"
'biocontainers/scanpy:1.7.2--pyhdfd78af_0' }"

input:
tuple val (meta), path("${meta.id}/*")
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