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Add kmcp classifier #1023

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Add kmcp classifier

Add kmcp classifier #1023

Triggered via pull request July 6, 2023 12:59
@jfy133jfy133
synchronize #312
sofstam:add_kmcp_dev
Status Failure
Total duration 1h 11m 34s
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ci.yml

on: pull_request
Matrix: Test KrakenUniq with workflow parameters
Matrix: Test MALT with workflow parameters
Matrix: Test mOTUs with workflow parameters
Matrix: Run pipeline with test data
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10 errors
Run pipeline with test data (latest-everything, --preprocessing_qc_tool falco)
Process returned exit code 1 Launched as "nextflow run ${GITHUB_WORKSPACE} -profile test,docker --outdir ./results --preprocessing_qc_tool falco" Launched at "/home/runner/work/taxprofiler/taxprofiler" Attempts exhausted, made 3 attempts : Attempt #1 started at : 13:00:15 GMT+0000 (Coordinated Universal Time) Attempt #2 started at : 13:01:00 GMT+0000 (Coordinated Universal Time) Attempt #3 started at : 13:01:33 GMT+0000 (Coordinated Universal Time)
Run pipeline with test data (latest-everything, --shortread_qc_tool fastp)
Process returned exit code 1 Launched as "nextflow run ${GITHUB_WORKSPACE} -profile test,docker --outdir ./results --shortread_qc_tool fastp" Launched at "/home/runner/work/taxprofiler/taxprofiler" Attempts exhausted, made 3 attempts : Attempt #1 started at : 13:00:14 GMT+0000 (Coordinated Universal Time) Attempt #2 started at : 13:00:49 GMT+0000 (Coordinated Universal Time) Attempt #3 started at : 13:01:16 GMT+0000 (Coordinated Universal Time)
Run pipeline with test data (23.04.0, --preprocessing_qc_tool falco)
Process returned exit code 1 Launched as "nextflow run ${GITHUB_WORKSPACE} -profile test,docker --outdir ./results --preprocessing_qc_tool falco" Launched at "/home/runner/work/taxprofiler/taxprofiler" Attempts exhausted, made 3 attempts : Attempt #1 started at : 13:00:13 GMT+0000 (Coordinated Universal Time) Attempt #2 started at : 13:00:52 GMT+0000 (Coordinated Universal Time) Attempt #3 started at : 13:01:24 GMT+0000 (Coordinated Universal Time)
Run pipeline with test data (23.04.0, --shortread_qc_tool fastp)
Process returned exit code 1 Launched as "nextflow run ${GITHUB_WORKSPACE} -profile test,docker --outdir ./results --shortread_qc_tool fastp" Launched at "/home/runner/work/taxprofiler/taxprofiler" Attempts exhausted, made 3 attempts : Attempt #1 started at : 13:00:15 GMT+0000 (Coordinated Universal Time) Attempt #2 started at : 13:00:54 GMT+0000 (Coordinated Universal Time) Attempt #3 started at : 13:01:36 GMT+0000 (Coordinated Universal Time)
Run pipeline with test data (23.04.0, --shortread_qc_tool adapterremoval)
Process returned exit code 1 Launched as "nextflow run ${GITHUB_WORKSPACE} -profile test,docker --outdir ./results --shortread_qc_tool adapterremoval" Launched at "/home/runner/work/taxprofiler/taxprofiler" Attempts exhausted, made 3 attempts : Attempt #1 started at : 13:00:17 GMT+0000 (Coordinated Universal Time) Attempt #2 started at : 13:00:58 GMT+0000 (Coordinated Universal Time) Attempt #3 started at : 13:01:41 GMT+0000 (Coordinated Universal Time)
Run pipeline with test data (latest-everything, --shortread_qc_tool adapterremoval)
Process returned exit code 1 Launched as "nextflow run ${GITHUB_WORKSPACE} -profile test,docker --outdir ./results --shortread_qc_tool adapterremoval" Launched at "/home/runner/work/taxprofiler/taxprofiler" Attempts exhausted, made 3 attempts : Attempt #1 started at : 13:00:16 GMT+0000 (Coordinated Universal Time) Attempt #2 started at : 13:00:52 GMT+0000 (Coordinated Universal Time) Attempt #3 started at : 13:01:29 GMT+0000 (Coordinated Universal Time)
Run pipeline with test data (23.04.0, --shortread_complexityfilter_tool prinseqplusplus)
Process returned exit code 1 Launched as "nextflow run ${GITHUB_WORKSPACE} -profile test,docker --outdir ./results --shortread_complexityfilter_tool prinseqplusplus" Launched at "/home/runner/work/taxprofiler/taxprofiler" Attempts exhausted, made 3 attempts : Attempt #1 started at : 13:00:17 GMT+0000 (Coordinated Universal Time) Attempt #2 started at : 13:01:13 GMT+0000 (Coordinated Universal Time) Attempt #3 started at : 13:01:50 GMT+0000 (Coordinated Universal Time)
Run pipeline with test data (latest-everything, --shortread_complexityfilter_tool prinseqplusplus)
Process returned exit code 1 Launched as "nextflow run ${GITHUB_WORKSPACE} -profile test,docker --outdir ./results --shortread_complexityfilter_tool prinseqplusplus" Launched at "/home/runner/work/taxprofiler/taxprofiler" Attempts exhausted, made 3 attempts : Attempt #1 started at : 13:00:20 GMT+0000 (Coordinated Universal Time) Attempt #2 started at : 13:01:15 GMT+0000 (Coordinated Universal Time) Attempt #3 started at : 13:02:10 GMT+0000 (Coordinated Universal Time)
Run pipeline with test data (23.04.0, --shortread_complexityfilter_tool bbduk)
Process returned exit code 1 Launched as "nextflow run ${GITHUB_WORKSPACE} -profile test,docker --outdir ./results --shortread_complexityfilter_tool bbduk" Launched at "/home/runner/work/taxprofiler/taxprofiler" Attempts exhausted, made 3 attempts : Attempt #1 started at : 13:00:10 GMT+0000 (Coordinated Universal Time) Attempt #2 started at : 13:00:53 GMT+0000 (Coordinated Universal Time) Attempt #3 started at : 13:01:26 GMT+0000 (Coordinated Universal Time)
Run pipeline with test data (latest-everything, --shortread_complexityfilter_tool bbduk)
Process returned exit code 1 Launched as "nextflow run ${GITHUB_WORKSPACE} -profile test,docker --outdir ./results --shortread_complexityfilter_tool bbduk" Launched at "/home/runner/work/taxprofiler/taxprofiler" Attempts exhausted, made 3 attempts : Attempt #1 started at : 13:00:16 GMT+0000 (Coordinated Universal Time) Attempt #2 started at : 13:01:04 GMT+0000 (Coordinated Universal Time) Attempt #3 started at : 13:04:44 GMT+0000 (Coordinated Universal Time)