Update GitHub Actions

nf-core · Oct 25, 2024 · 1dac597 · 1dac597
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Showing 7 changed files with 15 additions and 15 deletions.
diff --git a/.github/workflows/add-netlify-link.yml b/.github/workflows/add-netlify-link.yml
@@ -12,7 +12,7 @@ jobs:
     steps:
       - name: Check for changed files
         id: changed-files
-        uses: tj-actions/changed-files@48d8f15b2aaa3d255ca5af3eba4870f807ce6b3c # v45
+        uses: tj-actions/changed-files@c3a1bb2c992d77180ae65be6ae6c166cf40f857c # v45
 
       - name: Add Netlify link to PR
         if: steps.changed-files.outputs.all_changed_files != ''

diff --git a/.github/workflows/add-tools-api-docs.yml b/.github/workflows/add-tools-api-docs.yml
@@ -30,7 +30,7 @@ jobs:
           npm install remark unist-util-visit
 
       # Install pre-commit
-      - uses: actions/setup-python@f677139bbe7f9c59b41e40162b753c062f5d49a3 # v5
+      - uses: actions/setup-python@0b93645e9fea7318ecaed2b359559ac225c90a2b # v5
         with:
           python-version: 3.11
 

diff --git a/.github/workflows/build-json-files-and-md-cache.yml b/.github/workflows/build-json-files-and-md-cache.yml
@@ -15,14 +15,14 @@ jobs:
 
     steps:
       # Set up the main website repo
-      - uses: actions/checkout@692973e3d937129bcbf40652eb9f2f61becf3332 # v4
+      - uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683 # v4
         with:
           fetch-depth: 0 # Don't do a shallow clone
           token: ${{secrets.NF_CORE_BOT_AUTH_TOKEN}} # Needed for pushing back to the repo
 
       # install npm dependencies
       - name: Set up node.js
-        uses: actions/setup-node@0a44ba7841725637a19e28fa30b79a866c81b0a6 # v4
+        uses: actions/setup-node@39370e3970a6d050c480ffad4ff0ed4d3fdee5af # v4
         with:
           node-version: 20
           cache: 'npm'

diff --git a/.github/workflows/fix-linting.yml b/.github/workflows/fix-linting.yml
@@ -13,7 +13,7 @@ jobs:
     runs-on: ubuntu-latest
     steps:
       # Use the @nf-core-bot token to check out so we can push later
-      - uses: actions/checkout@692973e3d937129bcbf40652eb9f2f61becf3332 # v4
+      - uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683 # v4
         with:
           token: ${{ secrets.nf_core_bot_auth_token }}
 
@@ -32,12 +32,12 @@ jobs:
           GITHUB_TOKEN: ${{ secrets.nf_core_bot_auth_token }}
 
       # Install and run pre-commit
-      - uses: actions/setup-python@f677139bbe7f9c59b41e40162b753c062f5d49a3 # v5
+      - uses: actions/setup-python@0b93645e9fea7318ecaed2b359559ac225c90a2b # v5
         with:
           python-version: 3.11
 
       # install prettier plugins
-      - uses: actions/setup-node@0a44ba7841725637a19e28fa30b79a866c81b0a6 # v4
+      - uses: actions/setup-node@39370e3970a6d050c480ffad4ff0ed4d3fdee5af # v4
         with:
           node-version: 20
       - run: npm install --only=dev

diff --git a/.github/workflows/linting.yml b/.github/workflows/linting.yml
@@ -9,16 +9,16 @@ jobs:
   pre-commit:
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@692973e3d937129bcbf40652eb9f2f61becf3332 # v4
-      - uses: actions/setup-node@0a44ba7841725637a19e28fa30b79a866c81b0a6 # v4
+      - uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683 # v4
+      - uses: actions/setup-node@39370e3970a6d050c480ffad4ff0ed4d3fdee5af # v4
         with:
           node-version: 20
       - run: npm install --only=dev
       - uses: pre-commit/action@2c7b3805fd2a0fd8c1884dcaebf91fc102a13ecd # v3.0.1
   vale:
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@692973e3d937129bcbf40652eb9f2f61becf3332 # v4
+      - uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683 # v4
       - name: Install Vale
         run: |
           wget https://github.com/errata-ai/vale/releases/download/v3.0.5/vale_3.0.5_Linux_64-bit.tar.gz -O vale.tar.gz

diff --git a/.github/workflows/playwright.yml b/.github/workflows/playwright.yml
@@ -14,8 +14,8 @@ jobs:
     timeout-minutes: 30
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@692973e3d937129bcbf40652eb9f2f61becf3332 # v4
-      - uses: actions/setup-node@0a44ba7841725637a19e28fa30b79a866c81b0a6 # v4
+      - uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683 # v4
+      - uses: actions/setup-node@39370e3970a6d050c480ffad4ff0ed4d3fdee5af # v4
         with:
           node-version: 18
           cache: 'npm'
@@ -41,7 +41,7 @@ jobs:
           # done
         env:
           PLAYWRIGHT_TEST_BASE_URL: 'https://deploy-preview-${{github.event.pull_request.number}}--nf-core-main-site.netlify.app'
-      - uses: actions/upload-artifact@50769540e7f4bd5e21e526ee35c689e35e0d6874 # v4
+      - uses: actions/upload-artifact@b4b15b8c7c6ac21ea08fcf65892d2ee8f75cf882 # v4
         if: always()
         with:
           name: playwright-report

diff --git a/.github/workflows/rich-codex.yml b/.github/workflows/rich-codex.yml
@@ -6,12 +6,12 @@ jobs:
     runs-on: ubuntu-latest
     steps:
       - name: Check out the repo
-        uses: actions/checkout@692973e3d937129bcbf40652eb9f2f61becf3332 # v4
+        uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683 # v4
         with:
           # Use @nf-core-bot token to check out so we can push without a PR
           token: ${{ secrets.NF_CORE_BOT_AUTH_TOKEN }}
       - name: Set up Python
-        uses: actions/setup-python@f677139bbe7f9c59b41e40162b753c062f5d49a3 # v5
+        uses: actions/setup-python@0b93645e9fea7318ecaed2b359559ac225c90a2b # v5
         with:
           python-version: 3.x