Update PortalDataset.yaml (#496)

* Update PortalDataset.yaml * Rebuild NF.jsonld, json --------- Co-authored-by: Anh Nguyet Vu <[email protected]> Co-authored-by: nf-osi[bot] <[email protected]>
nf-osi · Aug 20, 2024 · 081f163 · 081f163
1 parent a6c3c47
commit 081f163
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Showing 4 changed files with 41 additions and 60 deletions.
diff --git a/NF.jsonld b/NF.jsonld
@@ -13642,6 +13642,9 @@
                 },
                 {
                     "@id": "bts:YearPublished"
+                },
+                {
+                    "@id": "bts:IsGlobalFeatured"
                 }
             ],
             "sms:validationRules": []
@@ -13800,6 +13803,23 @@
                 "int"
             ]
         },
+        {
+            "@id": "bts:IsGlobalFeatured",
+            "@type": "rdfs:Class",
+            "rdfs:comment": "TBD",
+            "rdfs:label": "IsGlobalFeatured",
+            "rdfs:subClassOf": [
+                {
+                    "@id": "bts:Thing"
+                }
+            ],
+            "schema:isPartOf": {
+                "@id": "http://schema.biothings.io"
+            },
+            "sms:displayName": "isGlobalFeatured",
+            "sms:required": "sms:false",
+            "sms:validationRules": []
+        },
         {
             "@id": "bts:FlowCytometryTemplate",
             "@type": "rdfs:Class",

diff --git a/modules/Template/PortalDataset.yaml b/modules/Template/PortalDataset.yaml
@@ -82,4 +82,7 @@ classes:
       yearPublished:
         range: integer
         required: false
+      isGlobalFeatured:
+        range: boolean
+        required: false
 
diff --git a/registered-json-schemas/PortalDataset.json b/registered-json-schemas/PortalDataset.json
@@ -197,10 +197,7 @@
         "items": {
           "type": "string"
         },
-        "type": [
-          "array",
-          "null"
-        ]
+        "type": "array"
       },
       "creator": {
         "type": "string"
@@ -254,10 +251,7 @@
         "title": "dataType"
       },
       "description": {
-        "type": [
-          "string",
-          "null"
-        ]
+        "type": "string"
       },
       "diseaseFocus": {
         "items": {
@@ -293,6 +287,9 @@
         "type": "array",
         "title": "fundingAgency"
       },
+      "isGlobalFeatured": {
+        "type": "boolean"
+      },
       "license": {
         "description": "License attached to the data. If indicates UNKNOWN or RESTRICTED-USE, data may not be used without further contact for terms.",
         "enum": [
@@ -340,17 +337,11 @@
           "title": "ManifestationEnum",
           "type": "string"
         },
-        "type": [
-          "array",
-          "null"
-        ],
+        "type": "array",
         "title": "manifestation"
       },
       "series": {
-        "type": [
-          "string",
-          "null"
-        ]
+        "type": "string"
       },
       "species": {
         "items": {
@@ -371,10 +362,7 @@
           "title": "SpeciesEnum",
           "type": "string"
         },
-        "type": [
-          "array",
-          "null"
-        ],
+        "type": "array",
         "title": "species"
       },
       "studyId": {
@@ -387,22 +375,13 @@
         "items": {
           "type": "string"
         },
-        "type": [
-          "array",
-          "null"
-        ]
+        "type": "array"
       },
       "yearProcessed": {
-        "type": [
-          "integer",
-          "null"
-        ]
+        "type": "integer"
       },
       "yearPublished": {
-        "type": [
-          "integer",
-          "null"
-        ]
+        "type": "integer"
       }
     },
     "required": [

diff --git a/registered-json-schemas/PortalStudy.json b/registered-json-schemas/PortalStudy.json
@@ -4,16 +4,10 @@
     "$id": "https://repo-prod.prod.sagebase.org/repo/v1/schema/type/registered/org.synapse.nf-portalstudy",
     "properties": {
       "accessRequirements": {
-        "type": [
-          "string",
-          "null"
-        ]
+        "type": "string"
       },
       "acknowledgementStatements": {
-        "type": [
-          "string",
-          "null"
-        ]
+        "type": "string"
       },
       "dataStatus": {
         "description": "",
@@ -73,10 +67,7 @@
           "title": "Data",
           "type": "string"
         },
-        "type": [
-          "array",
-          "null"
-        ]
+        "type": "array"
       },
       "diseaseFocus": {
         "items": {
@@ -94,10 +85,7 @@
           "title": "DiseaseFocusEnum",
           "type": "string"
         },
-        "type": [
-          "array",
-          "null"
-        ]
+        "type": "array"
       },
       "fundingAgency": {
         "type": "string"
@@ -106,10 +94,7 @@
         "items": {
           "type": "string"
         },
-        "type": [
-          "array",
-          "null"
-        ]
+        "type": "array"
       },
       "initiative": {
         "type": "string"
@@ -451,19 +436,13 @@
         "items": {
           "type": "string"
         },
-        "type": [
-          "array",
-          "null"
-        ]
+        "type": "array"
       },
       "relatedStudies": {
         "items": {
           "type": "string"
         },
-        "type": [
-          "array",
-          "null"
-        ]
+        "type": "array"
       },
       "studyFileviewId": {
         "type": "string"