Bugfix for modelsystem (no HSS-PS) (#302)

HSS-PS cell line was listed as attribute but not in annotationproperty.csv

modules/Sample/annotationProperty.csv

@@ -17,7 +17,7 @@ parentSpecimenID,"A unique identifier (non-PII) that represents the parent speci
 specimenID,"A unique identifier (non-PII) that represents the subspecimen (subsample) from which the data came, e.g. an ID that distinguishes between different parts of the same parent tumor specimen. This can be the A A unique identifier (non-PII) that represents the","","",FALSE,"",experimentalData,,,"",specimenID,Property,Biosample,annotationProperty,"","",many,"Typically annotated with a single ID, but many allowed for summary data."
 specimenIDSource,"Optional annotation describing where the specimen ID source derived from, e.g. the biobank providing samples or a providing lab.","","",FALSE,"","",,,"","",Property,Biosample,annotationProperty,"","","",This is not officially part of the template and only used as needed.
 aliquotID,A unique identifier (non-PII) that represents the aliquots used for e.g. replicate runs. This is linked to the specimenID.,"","",FALSE,"","",,,"","",Property,Biosample,annotationProperty,"","","",""
-modelSystemName,"A group of presumed common ancestry with clear-cut physiological but usually not morphological distinctions such as an animal model or cell line. EXAMPLE(S):  HEK293 (cell line), Minnesota5 (swine strain), DXL (poultry strain), RB51 (vaccine strain of Brucella abortus)","28cNF,3PNF_FiPSsv_PM_2,3PNF_SiPSsv_MM_11,5PNF_TDiPSsv_MM_4,5PNF_TDiPSsv_PM_6,6PNF_SiPSrv_PM_2,7PNF_SiPSrv_PM_12,90-8,AC007-hTERT,BJFF.6,Ben-Men-1,Dh5 alpha,Dhh-Cre; NF1Arg681*/flox Schwann Cells,ELK-TAD Luciferase Reporter HEK293 Stable,ELK-TAD Luciferase Reporter HEK293 Stable NF1 -/-,Fb93.1,GM11601,GM11602,GM23338,HBE135-E6E7,HEK293,HEK293 NF1 -/- Exon 17 #A15 G629R cryptic splice,HEK293 NF1 -/- Exon 17 #B48 G629R cryptic splice,HEK293 NF1 -/- Exon 47 insT #14,HEK293 NF1 -/- Exon 52 R2550X #5,HEK293 NF1 -/- clone 2,HEK293 NF1 -/- with R1306X mNf1 cDNA,HEK293 NF1 -/- with R192X mNf1 cDNA,HEK293 NF1 -/- with R1947X mNf1 cDNA,HEK293 NF1 -/- with R2550X mNf1 cDNA,HEK293 NF1 -/- with R461X mNf1 cDNA,HEK293 NF1 -/- with R681X mNf1 cDNA,HEK293 NF1 -/- with R816X mNf1 cDNA,HEK293 NF1 -/- with WT mNf1 cDNA,HEK293 NF1 -/- with WT tagged mNf1 cDNA,HeLa SilenciX NF1,JH-2-002-CL,JH-2-079-CL,JH-2-103-CL,JHU 2-002-CL,JHU 2-002-PDX,JHU 2-079-CL,JHU 2-079-PDX,JHU 2-103-CL,JHU 2-103-PDX,KCL024,KCL025,Lis42_NF1_1N,Lis47_NF1_2N,M3 MPNST,NCC-MPNST1-C1,NCC-MPNST2-C1,NCC-MPNST3-C1,NCC-MPNST3-X2-C1,NCC-MPNST4-C1,NCC-MPNST5-C1,NF1,NF1-R68X Embryonic cells,NF2-/- AC007-hTERT,Nf1-/- Epithelial lung cells,Nf1-/- HEK 293,Nf1-/- skin-derived precursor cells,Nf1Arg681*/+ ES,Nf1Arg681*/Arg681* ES,Nf1Arg681*/Arg681* MEFs,Nf2-/- Schwann SC (mouse) (PMID26554010),S462,S462.TY,S520,SC4 [Mouse schwannoma],ST88-14,STS-26T,SZ-NF1,SZ-NF2,SZ-NF4,Schwann cell NF1 -/- (iPN97.4 #24),Schwann cell NF1 -/- with R681X mNf1 cDNA,Schwann cell NF1 -/- with R816X mNf1 cDNA,Schwann cell NF1 -/- with WT tagged mNf1 cDNA,Schwann cell i28cNF NF1 -/- (#14),ScienCell Schwann cells,T265,WT ES,YST-1,cNF00.10a,cNF04.9a,cNF97.2a,cNF97.2b,cNF98.4c,cNF98.4d,hTERT NF1 ipNF00.6,hTERT NF1 ipNF03.3,hTERT NF1 ipNF04.4,hTERT NF1 ipNF05.5,hTERT NF1 ipNF05.5 (Mixed clones),hTERT NF1 ipNF95.11b C,hTERT NF1 ipNF95.11b C/T,hTERT NF1 ipNF95.6,hTERT NF1 ipn02.3 2λ,hTERT NF1 ipn06.2 A,hTERT NF1 ipnNF09.4,hTERT NF1 ipnNF95.11c,hTERT NF1 sipnNF95.12B,hTERT SC ipn02.8,hTERT SC ipn97.4,hTERT ipn02.3 2λ,hTERT ipn02.8,hiPSC,hiPSC-SCP,human foreskin fibroblasts,i28cNF,i21cNF,i18cNF,cNF18.1a,cNF97.5,cNF99.1,icNF99.1,iPSC NF1 +/- BJFF.6 bkgd,iPSC NF1 WT,iPSC Y489C; Exon 13 cryptic splice,icNF00.10a,icNF04.9a,icNF97.2a,icNF97.2b,icNF98.4c,icNF98.4d,sNF02.2,sNF94.3,sNF96.2,sc93.1,HSS-PS,HS-Sch-2,NMS-2,C57BL/6J,NOD scid gamma,NRG,B6;129S2-Trp53tm1Tyj Nf1tm1Tyj/J,B6;129-Trp53tm1Tyj Nf1tm1Tyj Suz12Gt(Betageo)1Khe/KcichJ,B6.129S2-Nf1tm1Tyj/J,B6.129S1-Nf1tm1Cbr/J,B6.129(Cg)-Nf1tm1Par/J,Prss56Cre;R26mT,Nf1-OPG,Nf1-OPG-Arg816","",FALSE,http://purl.obolibrary.org/obo/NCIT_C94171,neuro,,,list like,modelSystemName,Property,Biosample,annotationProperty,annotationProperty,Model_System,"",""
+modelSystemName,"A group of presumed common ancestry with clear-cut physiological but usually not morphological distinctions such as an animal model or cell line. EXAMPLE(S):  HEK293 (cell line), Minnesota5 (swine strain), DXL (poultry strain), RB51 (vaccine strain of Brucella abortus)","28cNF,3PNF_FiPSsv_PM_2,3PNF_SiPSsv_MM_11,5PNF_TDiPSsv_MM_4,5PNF_TDiPSsv_PM_6,6PNF_SiPSrv_PM_2,7PNF_SiPSrv_PM_12,90-8,AC007-hTERT,BJFF.6,Ben-Men-1,Dh5 alpha,Dhh-Cre; NF1Arg681*/flox Schwann Cells,ELK-TAD Luciferase Reporter HEK293 Stable,ELK-TAD Luciferase Reporter HEK293 Stable NF1 -/-,Fb93.1,GM11601,GM11602,GM23338,HBE135-E6E7,HEK293,HEK293 NF1 -/- Exon 17 #A15 G629R cryptic splice,HEK293 NF1 -/- Exon 17 #B48 G629R cryptic splice,HEK293 NF1 -/- Exon 47 insT #14,HEK293 NF1 -/- Exon 52 R2550X #5,HEK293 NF1 -/- clone 2,HEK293 NF1 -/- with R1306X mNf1 cDNA,HEK293 NF1 -/- with R192X mNf1 cDNA,HEK293 NF1 -/- with R1947X mNf1 cDNA,HEK293 NF1 -/- with R2550X mNf1 cDNA,HEK293 NF1 -/- with R461X mNf1 cDNA,HEK293 NF1 -/- with R681X mNf1 cDNA,HEK293 NF1 -/- with R816X mNf1 cDNA,HEK293 NF1 -/- with WT mNf1 cDNA,HEK293 NF1 -/- with WT tagged mNf1 cDNA,HeLa SilenciX NF1,JH-2-002-CL,JH-2-079-CL,JH-2-103-CL,JHU 2-002-CL,JHU 2-002-PDX,JHU 2-079-CL,JHU 2-079-PDX,JHU 2-103-CL,JHU 2-103-PDX,KCL024,KCL025,Lis42_NF1_1N,Lis47_NF1_2N,M3 MPNST,NCC-MPNST1-C1,NCC-MPNST2-C1,NCC-MPNST3-C1,NCC-MPNST3-X2-C1,NCC-MPNST4-C1,NCC-MPNST5-C1,NF1,NF1-R68X Embryonic cells,NF2-/- AC007-hTERT,Nf1-/- Epithelial lung cells,Nf1-/- HEK 293,Nf1-/- skin-derived precursor cells,Nf1Arg681*/+ ES,Nf1Arg681*/Arg681* ES,Nf1Arg681*/Arg681* MEFs,Nf2-/- Schwann SC (mouse) (PMID26554010),S462,S462.TY,S520,SC4 [Mouse schwannoma],ST88-14,STS-26T,SZ-NF1,SZ-NF2,SZ-NF4,Schwann cell NF1 -/- (iPN97.4 #24),Schwann cell NF1 -/- with R681X mNf1 cDNA,Schwann cell NF1 -/- with R816X mNf1 cDNA,Schwann cell NF1 -/- with WT tagged mNf1 cDNA,Schwann cell i28cNF NF1 -/- (#14),ScienCell Schwann cells,T265,WT ES,YST-1,cNF00.10a,cNF04.9a,cNF97.2a,cNF97.2b,cNF98.4c,cNF98.4d,hTERT NF1 ipNF00.6,hTERT NF1 ipNF03.3,hTERT NF1 ipNF04.4,hTERT NF1 ipNF05.5,hTERT NF1 ipNF05.5 (Mixed clones),hTERT NF1 ipNF95.11b C,hTERT NF1 ipNF95.11b C/T,hTERT NF1 ipNF95.6,hTERT NF1 ipn02.3 2λ,hTERT NF1 ipn06.2 A,hTERT NF1 ipnNF09.4,hTERT NF1 ipnNF95.11c,hTERT NF1 sipnNF95.12B,hTERT SC ipn02.8,hTERT SC ipn97.4,hTERT ipn02.3 2λ,hTERT ipn02.8,hiPSC,hiPSC-SCP,human foreskin fibroblasts,i28cNF,i21cNF,i18cNF,cNF18.1a,cNF97.5,cNF99.1,icNF99.1,iPSC NF1 +/- BJFF.6 bkgd,iPSC NF1 WT,iPSC Y489C; Exon 13 cryptic splice,icNF00.10a,icNF04.9a,icNF97.2a,icNF97.2b,icNF98.4c,icNF98.4d,sNF02.2,sNF94.3,sNF96.2,sc93.1,HSS-PS,HS-Sch-2,NMS-2,C57BL/6J,NOD scid gamma,NRG,B6;129S2-Trp53tm1Tyj Nf1tm1Tyj/J,B6;129-Trp53tm1Tyj Nf1tm1Tyj Suz12Gt(Betageo)1Khe/KcichJ,B6.129S2-Nf1tm1Tyj/J,B6.129S1-Nf1tm1Cbr/J,B6.129(Cg)-Nf1tm1Par/J,Prss56Cre;R26mT,Nf1-OPG,Nf1-OPG-Arg816,HS-PSS","",FALSE,http://purl.obolibrary.org/obo/NCIT_C94171,neuro,,,list like,modelSystemName,Property,Biosample,annotationProperty,annotationProperty,Model_System,"",""
 nf2Genotype,"Genotype of NF2 gene in the biospecimen from which the data were derived, if known","-/-, +/-, +/+, +/?, -/?, Unknown","",FALSE,"",neurofibromatosis,,,"",nf2Genotype,Property,Biosample,annotationProperty,"",Genotype,"",""
 nf1Genotype,"Genotype of NF1 gene in the biospecimen from which the data were derived, if known","-/-, +/-, +/+, +/?, -/?, Unknown","",FALSE,"",neurofibromatosis,,,"",nf1Genotype,Property,Biosample,annotationProperty,"",Genotype,"",""
 nf1Variant,"Variant (mutation) in the NF1 gene/protein in the biospecimen from which the data were derived, if known/applicable.","R816X,E178X,L578P,R1276Q,R1513X,V1621R,R2237X,Y2264X6","",FALSE,"",neurofibromatosis,,,"",nf1Mutation,Property,Biosample,annotationProperty,"",Genotype,"",See https://www.hgmd.cf.ac.uk/docs/mut_nom.html#general for nomenclature.