Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

ENH: Add three new workbench command interfaces #3306

Open
wants to merge 9 commits into
base: master
Choose a base branch
from

Conversation

a3sha2
Copy link

@a3sha2 a3sha2 commented Feb 21, 2021

I added the following interfaces for workbench

  • wb_command -cifti-correlation
  • wb_command -cifti-parcellate
  • wb_command -cifti-separate

a3sha2 and others added 6 commits February 21, 2021 04:41
add the following nipype interfaces
[x] wb_command  -cifti-correlation
[x] wb_command -cifti-parcellate
[x] "wb_command  -cifti-separate
@effigies effigies changed the title add some new interfaces for cifti ENH: Add three new workbench command interfaces Apr 30, 2021
@effigies effigies modified the milestones: 1.6.0, 1.6.1 Apr 30, 2021
The input cifti file must have a brain models mapping on the chosen
dimension, columns for .ptseries or .dtseries,
>>> cifticorr = CiftiCorrelation()
>>> cifticorr.inputs.in_file = 'sub-01XX_task-rest.ptseries.nii'
Copy link
Member

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

This file needs to exist (but should be empty) in https://github.com/nipy/nipype/tree/master/nipype/testing/data to allow the doctests to work.

@effigies
Copy link
Member

@a3sha2 I'm going to try to make a release in the next couple days. If you want to try to finish this off, I'd love to include it!

@a3sha2
Copy link
Author

a3sha2 commented May 27, 2021

sorry for delay @effigies, I will fix it this week

@effigies effigies modified the milestones: 1.6.1, future Jun 2, 2021
@a3sha2
Copy link
Author

a3sha2 commented Jun 8, 2021

@effigies I added test data

@a3sha2
Copy link
Author

a3sha2 commented Jun 8, 2021

I will work more on test dataset

@effigies effigies mentioned this pull request Oct 15, 2021
15 tasks
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

2 participants