Merge pull request #1618 from obi-ontology/issue-1602

add 'cow-baited arthropod trap'
obi-ontology · Nov 7, 2022 · e15bbdb · e15bbdb
2 parents 9b323a8 + de4c5d2
commit e15bbdb
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diff --git a/src/ontology/external-byhand.owl b/src/ontology/external-byhand.owl
@@ -198,6 +198,18 @@
 
 
 
+    <!-- http://purl.obolibrary.org/obo/RO_0002215 -->
+
+    <owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0002215">
+        <rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/BFO_0000004"/>
+        <rdfs:range rdf:resource="http://purl.obolibrary.org/obo/BFO_0000015"/>
+        <IAO_0000115>A relation between a material entity (such as a cell) and a process, in which the material entity has the ability to carry out the process.</IAO_0000115>
+        <IAO_0000118>has function realized in</IAO_0000118>
+        <rdfs:label>capable of</rdfs:label>
+    </owl:ObjectProperty>
+
+
+
     <!-- http://purl.obolibrary.org/obo/RO_0002219 -->
 
     <owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0002219">
@@ -260,6 +272,18 @@
 
 
 
+    <!-- http://purl.obolibrary.org/obo/BFO_0000004 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/BFO_0000004"/>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/BFO_0000015 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/BFO_0000015"/>
+
+
+
     <!-- http://purl.obolibrary.org/obo/CLO_0000001 -->
 
     <owl:Class rdf:about="http://purl.obolibrary.org/obo/CLO_0000001">

diff --git a/src/ontology/modules/devices.owl b/src/ontology/modules/devices.owl
@@ -153,6 +153,12 @@
 
 
 
+    <!-- http://purl.obolibrary.org/obo/RO_0002215 -->
+
+    <owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0002215"/>
+
+
+
     <!-- http://purl.obolibrary.org/obo/RO_0002219 -->
 
     <owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0002219"/>
@@ -7904,6 +7910,12 @@
 
 
 
+    <!-- http://purl.obolibrary.org/obo/OBI_0002913 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0002913"/>
+
+
+
     <!-- http://purl.obolibrary.org/obo/OBI_0002920 -->
 
     <owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0002920">
@@ -8881,6 +8893,25 @@
 
 
 
+    <!-- http://purl.obolibrary.org/obo/OBI_0003481 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0003481">
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0000968"/>
+        <rdfs:subClassOf>
+            <owl:Restriction>
+                <owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0002215"/>
+                <owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/OBI_0002913"/>
+            </owl:Restriction>
+        </rdfs:subClassOf>
+        <obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">A resting arthropod trap that consists of a tent inside which an adult cow is tethered to the ground, in order to attract arthropods and collect those that rest on the interior walls of the tent.</obo:IAO_0000115>
+        <obo:IAO_0000117 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Judkins ORCID:0000-0001-6595-0902</obo:IAO_0000117>
+        <obo:IAO_0000119 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Sarah Kelly</obo:IAO_0000119>
+        <obo:IAO_0000233 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">https://github.com/obi-ontology/obi/issues/1602</obo:IAO_0000233>
+        <rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">cow-baited arthropod trap</rdfs:label>
+    </owl:Class>
+
+
+
     <!-- http://purl.obolibrary.org/obo/OBI_0302886 -->
 
     <owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0302886"/>

diff --git a/src/ontology/templates/devices.tsv b/src/ontology/templates/devices.tsv
@@ -458,6 +458,7 @@ OBI:0003402	Illumina MouseRef-8 v2.0 beadchip	Illumina MouseRef-8 v2.0 beadchip
 OBI:0003403	Affymetrix Mouse Exon Junction Array	Affymetrix Mouse Exon Junction Array			A DNA microarray manufactured by Affymetrix, used to identify exon-exon junctions associated with alternate splice variants in the mouse transcriptome.	https://academic.oup.com/bioinformatics/article/26/2/268/209989		Jain Aluvathingal|Michelle Giglio|Suvarna Nadendla			gEAR	https://github.com/obi-ontology/obi/issues/1546		DNA microarray				Affymetrix	
 OBI:0003404	Affymetrix Human Exon Junction Array	Affymetrix Human Exon Junction Array			A DNA microarray manufactured by Affymetrix, used to identify exon-exon junctions associated with alternate splice variants in the human transcriptome.	https://academic.oup.com/bioinformatics/article/26/2/268/209989		Jain Aluvathingal|Michelle Giglio|Suvarna Nadendla			gEAR	https://github.com/obi-ontology/obi/issues/1546		DNA microarray				Affymetrix	
 OBI:0003454	Mosquito Magnet Liberty Plus trap				An arthropod trap that is designed to emit a combination of carbon dioxide, heat, water, and oct-1-en-3-ol attractants while simultaneously using suction to trap arthropods. This trap has the same design as the Mosquito Magnet Pro trap but is smaller, is more lightweight, and uses a main line electricity supply instead of propane to power itself. Both use propane to produce the arthropod attractor.	VEuPathDB						https://github.com/obi-ontology/obi/issues/1523		arthropod trap					
+OBI:0003481	cow-baited arthropod trap				A resting arthropod trap that consists of a tent inside which an adult cow is tethered to the ground, in order to attract arthropods and collect those that rest on the interior walls of the tent.	Sarah Kelly		John Judkins ORCID:0000-0001-6595-0902				https://github.com/obi-ontology/obi/issues/1602		device					'capable of' some 'arthropod specimen collection process'
 OBI:0400005	A10-Analyzer	A10-Analyzer	ready for release		A A10 is a flow_cytometer_analyser manufactured by Apogee. It uses an arc lamp as a light source, with choices of 75W Xe, 75W Xe/Hg or 100W Hg arc lamps. It has filters and collectors for up to three fluorescent parameters and two scatter parameters. It uses analog electronics. The A10 can be used for measuring the properties of individual cells.	http://www.apogeeflow.com/flow_cytometry_products.htm		John Quinn						flow cytometer analyzer					
 OBI:0400006	A40-MiniFCM	A40-MiniFCM	ready for release		A A40-MiniFCM is a flow_cytometer_analyser that allows for the choice of one of four lasers (375nm, 405nm,488nm, 532nm, 635nm), and PMTs and filters for collecting up to four parameters. It uses digital electronics. A military version of this cytometer is available as well. The A40-MiniFCM is geared towards the most demanding applications such as archaea, bacteria and large virus.	http://www.apogeeflow.com/flow_cytometry_products.htm		John Quinn						flow cytometer analyzer					
 OBI:0400007	analog-to-digital converter	analog-to-digital converter	metadata incomplete	A2D|A-D	An analog-to-digital_converter is an instrument that converts an infinite resolution analog signal to a finite resolution digital signal.	http://en.wiktionary.org/wiki/Analog-to-Digital_Converter	The analog to digital converter transformed the analog output from the photomultiplier tube to a digital signal for collection.	John Quinn|Melanie Courtot						device	signal conversion function