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COB Transition Demo 1#1812

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sebastianduesing wants to merge 41 commits intomasterobi-ontology/obi:masterfrom cob_transition_1obi-ontology/obi:cob_transition_1Copy head branch name to clipboard

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Commits on Aug 5, 2024

• Switch non-versioned OMO import to the current version of OMO.

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• Replace RO-core import with OntoFox RO import.

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• Prepare IAO import module.

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• Remove BFO import.

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Commits on Aug 6, 2024

• Add COB import

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• Rename 'alternative term' column to 'alternative label' in all templates

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• Replace 'inheres in' and 'bearer of' with 'characteristic of' and 'has characteristic' in all templates

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• Redirect references to CHEBI:atom to COB:atom

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• Redirect references to CHEBI:molecular entity to COB:molecular entity

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Commits on Aug 7, 2024

• Update device module

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• Obsolete OBI:device

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Commits on Aug 13, 2024

• Fix typo in RO import

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• Remove mentions of CHEBI:molecular entity from assays.owl

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• Remove BFO:0000028

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Commits on Aug 20, 2024

• Redirect references to IAO:measurement datum to COB:measurement datum

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• Remove references to BFO:entity

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• Remove reference to BFO:continuant

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• Remove references to BFO:quality

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• Move IAO import of ICE out from under GDC

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• Remove unused information carrier term

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Commits on Aug 21, 2024

• Run make modules

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• Remove references to BFO:0000055 (realizes)

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• Remove references to RO:0000059 (concretizes)

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Commits on Aug 27, 2024

• Merge branch 'master' into cob_transition_1

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• Drop external-byhand.owl

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• Fix almost all unsatisfiability issues

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Commits on Aug 29, 2024

• Remove unused unsatisfiable class

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Commits on Aug 30, 2024

• Merge branch 'master' into cob_transition_1

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• Obsolete OBI:0001720

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• Merge branch 'cob_transition_1' of https://github.com/obi-ontology/obi into cob_transition_1

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• Remove usage of BFO_0000001

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• Remove usage of BFO_0000002

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• Remove usage of BFO_0000003

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• Remove usage of BFO_0000004

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• Remove usage of BFO_0000035

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Commits on Sep 3, 2024

• Fix multiple-definition conflict

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• Fix multiple-label conflicts

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• Relabel templates

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• Remove one missed label

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• Move 'region' out from under GDC

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Commits on Sep 5, 2024

• Restore labels for six OBI terms used in COB

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