Merge pull request #918 from obophenotype/release_v20201-02-01

New CL release

cl-base.obo

@@ -1,5 +1,5 @@
 format-version: 1.2
-data-version: cl/releases/2021-01-22/cl-base.owl
+data-version: cl/releases/2021-02-01/cl-base.owl
 subsetdef: added_for_HCA ""
 subsetdef: location_grouping ""
 subsetdef: ubprop:upper_level "abstract upper-level terms not directly useful for analysis"
@@ -22,7 +22,7 @@ property_value: http://purl.org/dc/elements/1.1/title "Cell Ontology" xsd:string
 property_value: http://purl.org/dc/elements/1.1/type IAO:8000001
 property_value: http://purl.org/dc/terms/license http://creativecommons.org/licenses/by/4.0/
 property_value: IAO:0000700 CL:0000000
-property_value: owl:versionInfo "2021-01-22" xsd:string
+property_value: owl:versionInfo "2021-02-01" xsd:string
 
 [Term]
 id: CL:0000000
@@ -21848,7 +21848,7 @@ synonym: "crypt stem cell of small intestine" BROAD []
 synonym: "stem cell of small intestine crypt of Lieberkuhn" EXACT []
 xref: https://orcid.org/0000-0003-4183-8865
 intersection_of: CL:0002250 ! intestinal crypt stem cell
-intersection_of: BFO:0000050 UBERON:0001984
+intersection_of: BFO:0000050 UBERON:0001241
 property_value: location_grouping "" xsd:string
 created_by: http://orcid.org/0000-0002-2825-0621
 
@@ -27392,6 +27392,71 @@ synonym: "nuclear bag2 intrafusal fiber" EXACT []
 is_a: CL:4023004 ! nuclear bag fiber
 created_by: http://orcid.org/0000-0001-7258-9596
 
+[Term]
+id: CL:4023010
+name: alpha7 Lamp5 GABAergic interneuron of primary motor cortex (Mus musculus)
+def: "A Lamp5 GABAergic cortical interneuron that is strongly labelled for α7 nAChRs. These cells are located in L1 of the primary motor cortex and have multipolar dendrites with vertically descending axonal collaterals that project deep into the column, usually branching and terminating in L5A. Unlike typical Lamp5 electrophysiology, they have Vip- and Sst-like firing properties, with active depolarizing hump at near-threshold membrane potentials, and  larger hyperpolarization sag, stronger burst, and rebound firing." [PMID:30413647, PMID:33184512]
+is_a: CL:0000099 ! interneuron
+relationship: RO:0002100 UBERON:0001384
+relationship: RO:0002215 GO:0061534
+relationship: RO:0002292 https://identifiers.org/ensembl:ENSMUSG00000027270 ! Lamp5
+created_by: http://orcid.org/0000-0001-7258-9596
+
+[Term]
+id: CL:4023011
+name: Lamp5 GABAergic cortical interneuron
+def: "A GABAergic neuron located in the cerebral cortex that expresses Lamp5" [PMID:30382198]
+xref: xref (ILX:0770149)
+intersection_of: CL:0000099 ! interneuron
+intersection_of: RO:0002100 UBERON:0000956
+intersection_of: RO:0002215 GO:0061534
+intersection_of: RO:0002292 https://identifiers.org/ensembl:ENSMUSG00000027270 ! Lamp5
+created_by: http://orcid.org/0000-0001-7258-9596
+
+[Term]
+id: CL:4023015
+name: sncg GABAergic cortical interneuron
+def: "A GABAergic neuron located in the cerebral cortex that expresses Gamma-synuclein" [PMID:33186530]
+def: "xref:(ILX:0770150)" []
+intersection_of: CL:0000099 ! interneuron
+intersection_of: RO:0002100 UBERON:0000956
+intersection_of: RO:0002215 GO:0061534
+intersection_of: RO:0002292 https://identifiers.org/ensembl:ENSMUSG00000023064 ! sncg
+created_by: http://orcid.org/0000-0001-7258-9596
+
+[Term]
+id: CL:4023016
+name: Vip GABAergic cortical interneuron
+def: "A GABAergic neuron located in the cerebral cortex that expresses vasoactive intestinal polypeptide" [PMID:33186530]
+xref: xref:(ILX\:0770151)
+intersection_of: CL:0000099 ! interneuron
+intersection_of: RO:0002100 UBERON:0000956
+intersection_of: RO:0002215 GO:0061534
+intersection_of: RO:0002292 https://identifiers.org/ensembl:ENSMUSG00000019772 ! vip
+created_by: http://orcid.org/0000-0001-7258-9596
+
+[Term]
+id: CL:4023017
+name: sst GABAergic cortical interneuron
+def: "A GABAergic neuron located in the cerebral cortex that expresses somatostatin (sst)" [PMID:27477017]
+xref: xref:(ILX\:0770152)
+intersection_of: CL:0000099 ! interneuron
+intersection_of: RO:0002100 UBERON:0000956
+intersection_of: RO:0002215 GO:0061534
+intersection_of: RO:0002292 https://identifiers.org/ensembl:ENSMUSG00000004366 ! sst
+created_by: http://orcid.org/0000-0001-7258-9596
+
+[Term]
+id: CL:4023018
+name: pvalb GABAergic cortical interneuron
+def: "A GABAergic interneuron located in the cerebral cortex that expresses Parvalbumin." [] {def="PMID:27477017"}
+xref: xref:(ILX\:0770154)
+intersection_of: CL:0000099 ! interneuron
+intersection_of: RO:0002100 UBERON:0000956
+intersection_of: RO:0002215 GO:0061534
+intersection_of: RO:0002292 https://identifiers.org/ensembl:ENSMUSG00000005716 ! pvalb
+created_by: http://orcid.org/0000-0001-7258-9596
+
 [Term]
 id: CP:0000000
 name: neutrophillic cytoplasm
@@ -27490,6 +27555,26 @@ is_a: GO:0005634
 intersection_of: GO:0005634
 intersection_of: RO:0000053 PATO:0002506
 
+[Term]
+id: https://identifiers.org/ensembl:ENSMUSG00000004366
+name: sst
+
+[Term]
+id: https://identifiers.org/ensembl:ENSMUSG00000005716
+name: pvalb
+
+[Term]
+id: https://identifiers.org/ensembl:ENSMUSG00000019772
+name: vip
+
+[Term]
+id: https://identifiers.org/ensembl:ENSMUSG00000023064
+name: sncg
+
+[Term]
+id: https://identifiers.org/ensembl:ENSMUSG00000027270
+name: Lamp5
+
 [Typedef]
 id: has_completed
 name: has_completed