Addresses #2202 NTR 'L6 IT Car3 glutamatergic neuron' (#2234)

* Addresses #2202 NTR L6 IT Car3 neuron * Update cl-edit.owl revise label, add synonym * Update cl-edit.owl add synonyms
obophenotype · Nov 23, 2023 · cc63f5d · cc63f5d
1 parent cd7e3fe
commit cc63f5d
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diff --git a/src/ontology/cl-edit.owl b/src/ontology/cl-edit.owl
@@ -2947,6 +2947,7 @@ Declaration(Class(obo:CL_4030064))
 Declaration(Class(obo:CL_4030065))
 Declaration(Class(obo:CL_4030066))
 Declaration(Class(obo:CL_4030067))
+Declaration(Class(obo:CL_4030068))
 Declaration(Class(obo:CL_4032000))
 Declaration(Class(obo:CL_4032001))
 Declaration(Class(obo:CL_4033000))
@@ -3057,6 +3058,7 @@ Declaration(Class(obo:PR_000001244))
 Declaration(Class(obo:PR_000002030))
 Declaration(Class(obo:PR_000002123))
 Declaration(Class(obo:PR_000003264))
+Declaration(Class(obo:PR_000004919))
 Declaration(Class(obo:PR_000005444))
 Declaration(Class(obo:PR_000005460))
 Declaration(Class(obo:PR_000007204))
@@ -31121,6 +31123,19 @@ AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:34004146") Annotation(ob
 AnnotationAssertion(rdfs:label obo:CL_4030067 "L5/6 near-projecting glutamatergic neuron")
 EquivalentClasses(obo:CL_4030067 ObjectIntersectionOf(obo:CL_4023012 ObjectSomeValuesFrom(obo:RO_0002100 obo:UBERON_8440002)))
 
+# Class: obo:CL_4030068 (L6 intratelencephalic projecting Car3 glutamatergic neuron)
+
+AnnotationAssertion(Annotation(oboInOwl:hasDbXref "doi:10.1016/j.cell.2021.04.021") Annotation(oboInOwl:hasDbXref "doi:10.1101/2022.11.06.515349") Annotation(oboInOwl:hasDbXref "doi:10.1101/2022.11.30.518285") obo:IAO_0000115 obo:CL_4030068 "An intratelencephalic-projecting glutamatergic neuron with a soma found in cortical layer 6 that expresses Car3.")
+AnnotationAssertion(<http://purl.org/dc/terms/contributor> obo:CL_4030068 <https://orcid.org/0000-0003-4389-9821>)
+AnnotationAssertion(<http://purl.org/dc/terms/date> obo:CL_4030068 "2023-11-23T09:16:14Z"^^xsd:dateTime)
+AnnotationAssertion(Annotation(oboInOwl:hasDbXref <https://orcid.org/0000-0003-4389-9821>) Annotation(oboInOwl:hasSynonymType obo:OMO_0003000) oboInOwl:hasExactSynonym obo:CL_4030068 "L6 IT Car3 glutamatergic neuron")
+AnnotationAssertion(Annotation(oboInOwl:hasDbXref "doi:10.1101/2022.11.06.515349") Annotation(oboInOwl:hasSynonymType obo:OMO_0003000) oboInOwl:hasRelatedSynonym obo:CL_4030068 "L6 IT Car3")
+AnnotationAssertion(Annotation(oboInOwl:hasDbXref "doi:10.1101/2022.11.06.515349") Annotation(oboInOwl:hasSynonymType obo:OMO_0003000) oboInOwl:hasRelatedSynonym obo:CL_4030068 "L6 IT Car3 neuron")
+AnnotationAssertion(Annotation(oboInOwl:hasDbXref "doi:10.1101/2022.11.30.518285") Annotation(oboInOwl:hasSynonymType obo:OMO_0003000) oboInOwl:hasRelatedSynonym obo:CL_4030068 "L6-IT-Car3")
+AnnotationAssertion(Annotation(oboInOwl:hasDbXref "doi:10.1101/2022.11.30.518285") Annotation(oboInOwl:hasSynonymType obo:OMO_0003000) oboInOwl:hasRelatedSynonym obo:CL_4030068 "L6-IT-Car3 cell")
+AnnotationAssertion(rdfs:label obo:CL_4030068 "L6 intratelencephalic projecting Car3 glutamatergic neuron")
+EquivalentClasses(obo:CL_4030068 ObjectIntersectionOf(obo:CL_4030065 ObjectSomeValuesFrom(obo:RO_0002100 obo:UBERON_0005395) ObjectSomeValuesFrom(obo:RO_0002292 obo:PR_000004919)))
+
 # Class: obo:CL_4032000 (club-like cell of the urethral epithelium)
 
 AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:30566875") Annotation(oboInOwl:hasDbXref "PMID:32497356") obo:IAO_0000115 obo:CL_4032000 "An epithelial cell of the urethra that has an expression profile similar to lung club cells. Club-like cells of the urethra epithelium are similar to lung club cells in their expression of SCGB1A1 and in their enrichment of immunomodulatory programs.")

diff --git a/src/ontology/imports/pr_terms.txt b/src/ontology/imports/pr_terms.txt
@@ -37,4 +37,5 @@ PR:P60041
 PR:Q9D387
 PR:Q9Z0F7
 PR:000001666
-PR:000007204
+PR:000007204
+PR:000004919