Merge pull request #2343 from obophenotype/fix-uncinate-fasciculus

Fix axioms on uncinate fasciculus and added disjoint for brainstem

src/ontology/uberon-edit.obo

@@ -34744,6 +34744,7 @@ xref: Wikipedia:Forebrain
 xref: XAO:0000011
 xref: ZFA:0000109
 is_a: UBERON:0002616 ! regional part of brain
+disjoint_from: UBERON:0002298 ! brainstem
 relationship: contributes_to_morphology_of UBERON:0000955 ! brain
 relationship: develops_from UBERON:0003080 ! anterior neural tube
 relationship: immediate_transformation_of UBERON:0006240 {evidence="definitional"} ! future forebrain
@@ -66003,7 +66004,12 @@ xref: SCTID:369083001
 xref: UMLS:C0228271 {source="BIRNLEX:983"}
 xref: Wikipedia:Uncinate_fasciculus
 is_a: UBERON:0005838 {source="FMA"} ! fasciculus of brain
-relationship: part_of UBERON:0003023 {source="NIFSTD"} ! pontine tegmentum
+relationship: overlaps UBERON:0002153 ! fastigial nucleus
+relationship: overlaps UBERON:0002275 ! reticular formation
+relationship: overlaps UBERON:0002298 ! brainstem
+relationship: overlaps UBERON:0002726 ! cervical spinal cord
+relationship: overlaps UBERON:0003023 {source="NIFSTD"} ! pontine tegmentum
+relationship: overlaps UBERON:0007228 ! vestibular nucleus
 property_value: depicted_by http://upload.wikimedia.org/wikipedia/commons/d/d1/Gray751.png xsd:anyURI
 
 [Term]
@@ -147135,8 +147141,8 @@ id: UBERON:0011390
 name: pudendal nerve
 def: "The pudendal nerve is a somatic nerve in the pelvic region that innervates the external genitalia of both sexes, as well as sphincters for the bladder and the rectum. It originates in Onuf's nucleus in the sacral region of the spinal cord." [Wikipedia:Pudendal_nerve]
 synonym: "internal pudendal nerve" RELATED [Wikipedia:Pudendal_nerve]
-synonym: "nervus pudendae" EXACT DEPRECATED [doi:10.1002/ca.23705]
 synonym: "nervus pudendae" EXACT LATIN [doi:10.1002/ca.23705]
+synonym: "nervus pudendae" EXACT DEPRECATED [doi:10.1002/ca.23705]
 synonym: "nervus pudendales" EXACT LATIN [doi:10.1002/ca.23705]
 synonym: "pudenal nerve" RELATED [Wikipedia:Pudendal_nerve]
 synonym: "pudendal" BROAD [Wikipedia:Pudendal_nerve]
@@ -175129,6 +175135,7 @@ xref: HBA:9284
 xref: http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=1444
 xref: NLX:98733
 is_a: UBERON:0002616 ! regional part of brain
+relationship: part_of UBERON:0003044 ! uncinate fasciculus
 relationship: part_of UBERON:0011299 {source="HBA"} ! white matter of telencephalon
 
 [Term]
@@ -190991,8 +190998,8 @@ name: rima vulvae
 def: "The fissure between the labia majora" [https://www.thefreedictionary.com/pudendal+cleft]
 synonym: "pudendal cleft" EXACT [FMA:19995]
 synonym: "pudendal cleft" EXACT DEPRECATED [doi:10.1002/ca.23705]
-synonym: "rima pudendi" EXACT DEPRECATED [doi:10.1002/ca.23705]
 synonym: "rima pudendi" EXACT LATIN [A09.2.01.006]
+synonym: "rima pudendi" EXACT DEPRECATED [doi:10.1002/ca.23705]
 synonym: "urogenital cleft" BROAD [https://www.thefreedictionary.com/pudendal+cleft]
 synonym: "vulvar slit" EXACT [https://www.thefreedictionary.com/pudendal+cleft]
 xref: FMA:19995