NTR-Thalamus

obophenotype · Nov 22, 2024 · 8f56e43 · 8f56e43
1 parent cfa8b75
commit 8f56e43
Showing 1 changed file with 11 additions and 3 deletions.
diff --git a/src/ontology/uberon-edit.obo b/src/ontology/uberon-edit.obo
@@ -45,9 +45,6 @@ synonymtypedef: PENDING_REVIEW "expert consultation and attribution required"
 synonymtypedef: SENSU "taxonomic disambiguation"
 synonymtypedef: SYSTEMATIC "a systematic synonym used as the base name for design patterns"
 default-namespace: uberon
-idspace: EFO http://www.ebi.ac.uk/efo/EFO_ 
-idspace: NIF_Subcellular http://www.neurolex.org/wiki/ 
-idspace: NIFEXT http://uri.neuinfo.org/nif/nifstd/nifext_ 
 treat-xrefs-as-equivalent: AEO
 treat-xrefs-as-equivalent: BILA
 treat-xrefs-as-equivalent: BSPO
@@ -34654,6 +34651,7 @@ xref: VHOG:0000657
 xref: Wikipedia:Thalamus
 xref: ZFA:0001215
 is_a: UBERON:0002616 ! regional part of brain
+is_a: UBERON:8800001 ! thalamus
 relationship: contributes_to_morphology_of UBERON:0001894 ! diencephalon
 relationship: in_lateral_side_of UBERON:0010225 {source="FMA-abduced-lr"} ! thalamic complex
 relationship: mutually_spatially_disjoint_with UBERON:0001898 {source="ABA"} ! hypothalamus
@@ -160184,6 +160182,7 @@ synonym: "medullary layers of thalamus" RELATED [Wikipedia:Medullary_laminae_of_
 xref: BAMS:Lam.med.thal
 xref: Wikipedia:Medullary_laminae_of_thalamus
 is_a: UBERON:0014531 ! white matter lamina of diencephalon
+is_a: UBERON:8800001 ! thalamus
 relationship: part_of UBERON:0010225 ! thalamic complex
 
 [Term]
@@ -163412,6 +163411,7 @@ xref: TAO:0007010
 xref: XAO:0004301
 xref: ZFA:0007010
 is_a: UBERON:0002616 ! regional part of brain
+is_a: UBERON:8800001 ! thalamus
 relationship: part_of UBERON:0010225 ! thalamic complex
 property_value: external_definition "Part of the forebrain that is ventral to the ventral thalamus and dorsal to the preoptic area. See page 44 of the Atlas of Early Zebrafish Brain Development[ZFIN:curator]." xsd:string {source="ZFIN:curator"}
 
@@ -224725,6 +224725,14 @@ relationship: dc-contributor https://orcid.org/0009-0005-7919-4905
 relationship: part_of UBERON:0001043 ! esophagus
 property_value: dcterms-date "2024-11-14T15:00:21Z" xsd:dateTime
 
+[Term]
+id: UBERON:8800001
+name: thalamus
+def: "The thalamus is composed by two grey matter structure of the diencephalon one in each hemisphere. It is located in the center of the brain, above the mesencephalon and the midbrain. The thalamus is a relay center for sensory and motor informations. It is composed of 50–60 nuclei that project to specific cortical areas, each nucleus can receive inputs from multiple cortical regions, creating feedback loops that enhance relevant signals while suppressing irrelevant ones. The organisation of thalamic afferents and efferents is contralateral, influencing both sensory and motor functions." [PMID:12192499, PMID:26618760, PMID:28450543, PMID:31194341]
+is_a: UBERON:0010225 ! thalamic complex
+relationship: dc-contributor https://orcid.org/0000-0002-0098-8958
+property_value: dcterms-date "2024-11-22T15:28:30Z" xsd:dateTime
+
 [Term]
 id: UBERON:8850000
 name: lumen of pulmonary alveolus