prepared new release

oborel · Oct 20, 2018 · b986d61 · b986d61
1 parent d852a55
commit b986d61
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Showing 44 changed files with 5,329 additions and 6,651 deletions.
diff --git a/bfo-classes-minimal.owl b/bfo-classes-minimal.owl
@@ -76,6 +76,15 @@
         <rdfs:subClassOf rdf:resource="http://www.geneontology.org/formats/oboInOwl#ObsoleteClass"/>
         <obo:IAO_0000115 xml:lang="en">A continuant  that is either dependent on one or other independent continuant  bearers or inheres in or is borne by other entities.</obo:IAO_0000115>
     </owl:Class>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/BFO_0000006 -->
+
+    <owl:Class rdf:about="&obo;BFO_0000006">
+        <rdfs:label xml:lang="en">spatial region</rdfs:label>
+        <rdfs:subClassOf rdf:resource="&obo;BFO_0000141"/>
+    </owl:Class>
 
 
 

diff --git a/core.owl b/core.owl
@@ -18,6 +18,71 @@
 
 
 
+    <!-- 
+    ///////////////////////////////////////////////////////////////////////////////////////
+    //
+    // Annotation properties
+    //
+    ///////////////////////////////////////////////////////////////////////////////////////
+     -->
+
+
+
+
+    <!-- http://purl.obolibrary.org/obo/IAO_0000111 -->
+
+    <owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000111"/>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/IAO_0000112 -->
+
+    <owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000112"/>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/IAO_0000114 -->
+
+    <owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000114"/>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/IAO_0000116 -->
+
+    <owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000116"/>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/IAO_0000118 -->
+
+    <owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000118"/>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/IAO_0000119 -->
+
+    <owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000119"/>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/IAO_0000600 -->
+
+    <owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000600"/>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/RO_0001900 -->
+
+    <owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/RO_0001900"/>
+
+
+
+    <!-- http://purl.org/dc/elements/1.1/source -->
+
+    <owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/source"/>
+
+
+
     <!-- 
     ///////////////////////////////////////////////////////////////////////////////////////
     //
@@ -405,6 +470,28 @@ A continuant cannot have an occurrent as part: use &apos;participates in&apos;.
 
     <owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0001025">
         <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#TransitiveProperty"/>
+        <rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/BFO_0000004"/>
+        <rdfs:domain>
+            <owl:Class>
+                <owl:intersectionOf rdf:parseType="Collection">
+                    <rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000004"/>
+                    <owl:Class>
+                        <owl:complementOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000006"/>
+                    </owl:Class>
+                </owl:intersectionOf>
+            </owl:Class>
+        </rdfs:domain>
+        <rdfs:range rdf:resource="http://purl.obolibrary.org/obo/BFO_0000004"/>
+        <rdfs:range>
+            <owl:Class>
+                <owl:intersectionOf rdf:parseType="Collection">
+                    <rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000004"/>
+                    <owl:Class>
+                        <owl:complementOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000006"/>
+                    </owl:Class>
+                </owl:intersectionOf>
+            </owl:Class>
+        </rdfs:range>
         <obo:IAO_0000111 xml:lang="en">located in</obo:IAO_0000111>
         <obo:IAO_0000112 xml:lang="en">my brain is located in my head</obo:IAO_0000112>
         <obo:IAO_0000112 xml:lang="en">this rat is located in this cage</obo:IAO_0000112>
@@ -416,6 +503,18 @@ A continuant cannot have an occurrent as part: use &apos;participates in&apos;.
         <dc:source>http://www.obofoundry.org/ro/#OBO_REL:located_in</dc:source>
         <rdfs:label xml:lang="en">located in</rdfs:label>
     </owl:ObjectProperty>
+    <owl:Axiom>
+        <owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/RO_0001025"/>
+        <owl:annotatedProperty rdf:resource="http://www.w3.org/2000/01/rdf-schema#range"/>
+        <owl:annotatedTarget rdf:resource="http://purl.obolibrary.org/obo/BFO_0000004"/>
+        <obo:IAO_0000116>This is redundant with the more specific &apos;independent and not spatial region&apos; constraint. We leave in the redundant axiom for use with reasoners that do not use negation.</obo:IAO_0000116>
+    </owl:Axiom>
+    <owl:Axiom>
+        <owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/RO_0001025"/>
+        <owl:annotatedProperty rdf:resource="http://www.w3.org/2000/01/rdf-schema#domain"/>
+        <owl:annotatedTarget rdf:resource="http://purl.obolibrary.org/obo/BFO_0000004"/>
+        <obo:IAO_0000116>This is redundant with the more specific &apos;independent and not spatial region&apos; constraint. We leave in the redundant axiom for use with reasoners that do not use negation.</obo:IAO_0000116>
+    </owl:Axiom>
 
 
 
@@ -521,5 +620,5 @@ A continuant cannot have an occurrent as part: use &apos;participates in&apos;.
 
 
 
-<!-- Generated by the OWL API (version 4.2.6.20160910-2108) https://github.com/owlcs/owlapi -->
+<!-- Generated by the OWL API (version 4.2.8.20170104-2310) https://github.com/owlcs/owlapi -->