tmp #19

	# This workflow uses actions that are not certified by GitHub.
	# They are provided by a third-party and are governed by
	# separate terms of service, privacy policy, and support
	# documentation.
	# This workflow will download a prebuilt Ruby version, install dependencies and run tests with Rake
	# For more information see: https://github.com/marketplace/actions/setup-ruby-jruby-and-truffleruby

	name: unit-tests

	on:
	push:
	pull_request_target:
	types: [ opened, reopened ]


	env:
	API_URL: ${{ secrets.API_URL }}
	API_KEY: ${{ secrets.API_KEY }}
	BIOMIXER_URL: ${{ secrets.BIOMIXER_URL }}
	FAIRNESS_URL: ${{ secrets.FAIRNESS_URL }}
	ANNOTATOR_URL: ${{ secrets.ANNOTATOR_URL }}
	DB_HOST: ${{ secrets.DB_HOST \|\| '127.0.0.1' }}
	DB_PORT: ${{ secrets.DB_PORT \|\| 3306 }}
	RAILS_ENV: test

	jobs:
	test:

	runs-on: ubuntu-latest
	steps:
	- uses: actions/checkout@v3
	- uses: actions/checkout@v3
	- uses: ruby/setup-ruby@v1
	with:
	ruby-version: 2.7.6 # Not needed with a .ruby-version file
	bundler-cache: true # runs 'bundle install' and caches installed gems automatically
	- name: set up config file
	run: cp .env.sample .env && cp config/database.yml.sample config/database.yml
	- name: build docker
	run: docker compose --profile cache-db up -d
	- name: wait for MySQL to start
	run: \|
	for i in {1..10}; do
	if nc -z ${{ env.DB_HOST }} ${{ env.DB_PORT }}; then
	break
	fi
	sleep 1
	done

	- name: run test docker
	run: RAILS_ENV=test bin/rails db:setup && bin/rails test -v

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