tmp #34
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| # This workflow uses actions that are not certified by GitHub. | |
| # They are provided by a third-party and are governed by | |
| # separate terms of service, privacy policy, and support | |
| # documentation. | |
| # This workflow will download a prebuilt Ruby version, install dependencies and run tests with Rake | |
| # For more information see: https://github.com/marketplace/actions/setup-ruby-jruby-and-truffleruby | |
| name: "Ruby on Rails CI" | |
| on: | |
| push: | |
| pull_request_target: | |
| types: [ opened, reopened ] | |
| env: | |
| API_URL: ${{ secrets.API_URL }} | |
| API_KEY: ${{ secrets.API_KEY }} | |
| BIOMIXER_URL: ${{ secrets.BIOMIXER_URL }} | |
| FAIRNESS_URL: ${{ secrets.FAIRNESS_URL }} | |
| ANNOTATOR_URL: ${{ secrets.ANNOTATOR_URL }} | |
| jobs: | |
| test: | |
| runs-on: ubuntu-latest | |
| services: | |
| mysql: | |
| image: mysql:latest | |
| ports: | |
| - "3306:3306" | |
| env: | |
| MYSQL_ROOT_PASSWORD: 'bp_user' | |
| steps: | |
| - name: Checkout code | |
| uses: actions/checkout@v3 | |
| # Add or replace dependency steps here | |
| - name: Install Ruby and gems | |
| uses: ruby/setup-ruby@55283cc23133118229fd3f97f9336ee23a179fcf # v1.146.0 | |
| with: | |
| ruby-version: 2.7.8 | |
| bundler-cache: true | |
| # Add or replace database setup steps here | |
| - name: set up config file | |
| run: cp config/database.yml.sample config/database.yml | |
| - name: Set up database schema | |
| run: RAILS_ENV=test bin/rails db:setup | |
| # Add or replace test runners here | |
| - name: Run tests | |
| run: RAILS_ENV=test bin/rake | |
| lint: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout code | |
| uses: actions/checkout@v3 | |
| - name: Install Ruby and gems | |
| uses: ruby/setup-ruby@55283cc23133118229fd3f97f9336ee23a179fcf # v1.146.0 | |
| with: | |
| ruby-version: 2.7.8 | |
| bundler-cache: true | |
| # Add or replace any other lints here | |
| - name: Security audit dependencies | |
| run: bin/bundler-audit --update | |
| - name: Security audit application code | |
| run: bin/brakeman -q -w2 | |
| - name: Lint Ruby files | |
| run: bin/rubocop --parallel |