Merge to master: Release 3.0.2 - Fix some bugs related to the federation release

.env.sample

@@ -10,6 +10,8 @@ API_KEY=
 
 UI_THEME=ontoportal
 
+TWITTER_NEWS=
+
 BIOMIXER_URL=
 BIOMIXER_APIKEY=
 

app/controllers/admin/categories_controller.rb

@@ -11,6 +11,15 @@ class Admin::CategoriesController < ApplicationController
 
   def index
     @categories = _categories
+
+    @parents_list = Hash.new { |hash, key| hash[key] = [] }
+    @categories.each do |category|
+      category.parentCategory.each do |parent|
+        @parents_list[parent] << category.acronym
+      end
+    end
+
+
   end
 
   def new

app/controllers/ontologies_controller.rb

@@ -60,17 +60,20 @@ def ontologies_filter
         end
       end.flatten
 
-      unless request_portals.empty?
+      if federated_request?
         streams += [
           replace('categories_refresh_for_federation') do
-            key = "categories"
+            key = 'categories'
             objects, checked_values, _ = @filters[key.to_sym]
+            objects = keep_only_root_categories(objects)
+
             helpers.browse_filter_section_body(checked_values: checked_values,
                                                key: key, objects: objects,
                                                counts: @count_objects[key.to_sym])
           end
         ]
       end
+
     else
       streams = [replace("ontologies_list_view-page-#{@page.page}", partial: 'ontologies/browser/ontologies')]
     end
@@ -583,4 +586,9 @@ def search_first_instance_id
     return !results.blank? ? results.first[:name] : nil
   end
 
+  def keep_only_root_categories(categories)
+    categories.select do |category|
+      category.id.start_with?(rest_url) || category.parentCategory.blank?
+    end
+  end
 end

app/helpers/application_helper.rb

@@ -451,4 +451,13 @@ def categories_select(id: nil, name: nil, selected: 'None')
     render Input::SelectComponent.new(id: id, name: name, value: categories_for_select, selected: selected, multiple: true)
   end
 
+  def category_is_parent?(parents_list, category)
+    is_parent = parents_list.keys.include?(category.id)
+    parent_error_message = t('admin.categories.category_used_parent')
+    parents_list[category.id].each do |c|
+      parent_error_message = "#{parent_error_message} #{c}"
+    end
+    [is_parent,parent_error_message]
+  end
+
 end

app/helpers/fair_score_helper.rb

@@ -5,7 +5,7 @@ def user_apikey
   end
 
   def fairness_service_enabled?
-    !$FAIRNESS_DISABLED
+    $FAIRNESS_DISABLED == 'false' || !$FAIRNESS_DISABLED
   end
 
   def get_fairness_service_url(apikey = user_apikey)

app/helpers/instances_helper.rb

@@ -52,7 +52,7 @@ def link_to_class(ontology_acronym, conceptid)
 
   def link_to_property(property, ontology_acronym)
     link_to extract_label_from(property),
-            ontology_path(ontology_acronym, p: 'properties'),
+            ontology_path(ontology_acronym, p: 'properties', propertyid: property),
             { target: '_blank'}
   end
 

app/views/admin/categories/_category.html.haml

@@ -1,5 +1,6 @@
 %tr.human{:id => category.id.split('/').last}
-  - count = category.ontologies&.size || 0
+  - count = category.ontologies&.size || 0 
+  - is_parent, parent_error_message = category_is_parent?(@parents_list, category)
   %td
     %div{style: 'width: 250px'}
       %div.text-truncate{title: category.name}
@@ -18,8 +19,11 @@
         = link_to_modal(nil, edit_admin_category_path(category.id.split('/').last), data: {show_modal_title_value:  category.name}) do
           = t('admin.categories.edit_button')
       %span
-        - if count.zero?
-          = button_to t('admin.categories.delete'), CGI.unescape(admin_category_path(category.id.split('/').last)), method: :delete, class: 'btn btn-link',  form: {data: { turbo: true, turbo_confirm: t('admin.categories.turbo_confirm'), turbo_frame: '_top'}}
-        - else
+        - if !count.zero?
           %span{data: { controller: 'tooltip' }, title: t('admin.categories.info_error_delete')}
             = link_to t('admin.categories.delete'), "", class: 'btn btn-link disabled'
+        - elsif is_parent
+          %span{data: { controller: 'tooltip' }, title: parent_error_message}
+            = link_to t('admin.categories.delete'), "", class: 'btn btn-link disabled'
+        - else
+          = button_to t('admin.categories.delete'), CGI.unescape(admin_category_path(category.id.split('/').last)), method: :delete, class: 'btn btn-link',  form: {data: { turbo: true, turbo_confirm: t('admin.categories.turbo_confirm'), turbo_frame: '_top'}}

app/views/home/index.html.haml

@@ -165,15 +165,15 @@
             %a{:href => "/landscape#fairness_assessment"}
               %div.home-fair-details
                 %p= t('home.fair_details')
-
-      .home-sub-section-right
-        %h4= t('home.twitter_news')
-        %hr.home-section-line
-        .home-card.home-twitter-news
-          %a.twitter-timeline{"data-height" => "360", :href => "https://twitter.com/lagroportal?ref_src=twsrc%5Etfw"}
-            .home-twitter-loader
-              = render LoaderComponent.new(type: 'pulsing')
-          %script{:async => "", :charset => "utf-8", :src => "https://platform.twitter.com/widgets.js"}
+      - if !$TWITTER_NEWS.blank?
+        .home-sub-section-right
+          %h4= t('home.twitter_news')
+          %hr.home-section-line
+          .home-card.home-twitter-news
+            %a.twitter-timeline{"data-height" => "360", :href => $TWITTER_NEWS}
+              .home-twitter-loader
+                = render LoaderComponent.new(type: 'pulsing')
+            %script{:async => "", :charset => "utf-8", :src => "https://platform.twitter.com/widgets.js"}
 
   - if slices_enabled?
     .home-section

config/bioportal_config_env.rb.sample

@@ -8,6 +8,9 @@ $ORG_URL = ENV['ORG_URL']
 # Site name (required)
 $SITE = ENV['SITE']
 
+# Twitter section
+$TWITTER_NEWS = ENV["TWITTER_NEWS"]
+
 # Full string for site, EX: "NCBO BioPortal", do not modify
 $ORG_SITE = $ORG.nil? || $ORG.empty? ? $SITE : "#{$ORG} #{$SITE}"
 

config/locales/en.yml

@@ -193,6 +193,7 @@ en:
       problem_of_updating: Problem updating the category - %{message}
       category_deleted_successfully: Category successfully deleted in %{time}s
       problem_of_deleting: Problem deleting the category - %{message}
+      category_used_parent: "Can't delete category, used as a parent category for:"
       edit_button: "Edit"
       delete: Delete
       info_error_delete: Can't delete this category because still used

config/locales/fr.yml

@@ -199,6 +199,7 @@ fr:
       problem_of_updating: Problème lors de la mise à jour de la catégorie - %{message}
       category_deleted_successfully: Catégorie supprimée avec succès en %{time}s
       problem_of_deleting: Problème lors de la suppression de la catégorie - %{message}
+      category_used_parent: "Impossible de supprimer la catégorie, utilisée comme catégorie parente pour:"
       edit_button: Éditer
       delete: Supprimer
       info_error_delete: Impossible de supprimer cette catégorie car elle est encore utilisée