precommit after autoupdate

.pre-commit-config.yaml

@@ -4,18 +4,18 @@ default_stages: [commit]
 
 repos:
   - repo: https://github.com/psf/black
-    rev: 24.8.0
+    rev: 25.1.0
     hooks:
       - id: black
 
   - repo: https://github.com/timothycrosley/isort
-    rev: 5.13.2
+    rev: 6.0.0
     hooks:
       - id: isort
         args: ["--profile", "black"]
 
   - repo: https://github.com/pre-commit/pre-commit-hooks
-    rev: v4.6.0
+    rev: v5.0.0
     hooks:
       - id: trailing-whitespace
       - id: end-of-file-fixer

PyMPDATA/boundary_conditions/__init__.py

@@ -1,4 +1,4 @@
-""" classes representing boundary conditions """
+"""classes representing boundary conditions"""
 
 from .constant import Constant
 from .extrapolated import Extrapolated

PyMPDATA/boundary_conditions/constant.py

@@ -1,4 +1,4 @@
-""" boundary condition filling halos with a constant value """
+"""boundary condition filling halos with a constant value"""
 
 # pylint: disable=too-many-arguments
 from functools import lru_cache

PyMPDATA/boundary_conditions/extrapolated.py

@@ -1,6 +1,6 @@
-""" boundary condition extrapolating values from the edge to the halo for scalars
+"""boundary condition extrapolating values from the edge to the halo for scalars
 and returning edge-of-the-domain value for vectors (with all negative scalar values
-set to zero) """
+set to zero)"""
 
 # pylint: disable=too-many-arguments
 from functools import lru_cache

PyMPDATA/boundary_conditions/periodic.py

@@ -1,4 +1,4 @@
-""" periodic/cyclic boundary condition logic """
+"""periodic/cyclic boundary condition logic"""
 
 from functools import lru_cache
 

PyMPDATA/boundary_conditions/polar.py

@@ -1,4 +1,4 @@
-""" polar boundary condition for use in with spherical coordinates """
+"""polar boundary condition for use in with spherical coordinates"""
 
 from functools import lru_cache
 

PyMPDATA/impl/__init__.py

@@ -1,2 +1,2 @@
-""" package internals, if anything from within is needed to be referenced
-    from user code, please report implementation leak into public API as an issue """
+"""package internals, if anything from within is needed to be referenced
+from user code, please report implementation leak into public API as an issue"""

PyMPDATA/impl/clock.py

@@ -1,5 +1,5 @@
-""" CPU-time returning clock() function which works from within njit-ted code,
-    no time unit guaranteed, returned value only for relative time measurements """
+"""CPU-time returning clock() function which works from within njit-ted code,
+no time unit guaranteed, returned value only for relative time measurements"""
 
 import ctypes
 

PyMPDATA/impl/domain_decomposition.py

@@ -1,4 +1,4 @@
-""" logic defining domain decomposition scheme for multi-threading """
+"""logic defining domain decomposition scheme for multi-threading"""
 
 import math
 

PyMPDATA/impl/enumerations.py

@@ -1,5 +1,5 @@
-""" common constants named with the intention of improving code readibility
-(mostly integer indices used for indexing tuples) """
+"""common constants named with the intention of improving code readibility
+(mostly integer indices used for indexing tuples)"""
 
 import numpy as np
 

PyMPDATA/impl/field.py

@@ -1,5 +1,5 @@
-""" common logic for `PyMPDATA.scalar_field.ScalarField` and
- `PyMPDATA.vector_field.VectorField` classes """
+"""common logic for `PyMPDATA.scalar_field.ScalarField` and
+`PyMPDATA.vector_field.VectorField` classes"""
 
 import abc
 from collections import namedtuple

PyMPDATA/impl/formulae_antidiff.py

@@ -1,5 +1,5 @@
-""" antidiffusive velocity formulae incl. divergent-flow,
-    third-order-terms, DPDC and partially also infinite-gauge logic """
+"""antidiffusive velocity formulae incl. divergent-flow,
+third-order-terms, DPDC and partially also infinite-gauge logic"""
 
 import numba
 import numpy as np

PyMPDATA/impl/formulae_axpy.py

@@ -1,4 +1,4 @@
-""" basic a*x+y operation logic for use in Fickian term handling """
+"""basic a*x+y operation logic for use in Fickian term handling"""
 
 import numba
 

PyMPDATA/impl/formulae_flux.py

@@ -1,4 +1,4 @@
-""" staggered-grid flux logic including infinite-gauge logic handling """
+"""staggered-grid flux logic including infinite-gauge logic handling"""
 
 import numba
 import numpy as np

PyMPDATA/impl/formulae_laplacian.py

@@ -1,4 +1,4 @@
-""" logic for handling the Fickian term by modifying physical velocity """
+"""logic for handling the Fickian term by modifying physical velocity"""
 
 import numba
 

PyMPDATA/impl/formulae_nonoscillatory.py

@@ -1,5 +1,5 @@
-""" the nonoscillatory option for MPDATA as introduced in
-    [Smolarkiewicz & Grabowski 1990](https://doi.org/10.1016/0021-9991(90)90105-A) """
+"""the nonoscillatory option for MPDATA as introduced in
+[Smolarkiewicz & Grabowski 1990](https://doi.org/10.1016/0021-9991(90)90105-A)"""
 
 import numba
 import numpy as np

PyMPDATA/impl/formulae_upwind.py

@@ -1,4 +1,4 @@
-""" upwind/donor-cell formula logic including G-factor handling """
+"""upwind/donor-cell formula logic including G-factor handling"""
 
 import numba
 

PyMPDATA/impl/indexers.py

@@ -1,4 +1,4 @@
-""" array indexing logic for 1D, 2D and 3D staggered grids """
+"""array indexing logic for 1D, 2D and 3D staggered grids"""
 
 # pylint: disable=missing-function-docstring
 

PyMPDATA/impl/meta.py

@@ -1,4 +1,4 @@
-""" constants for indexing and a factory for creating the "meta" tuples """
+"""constants for indexing and a factory for creating the "meta" tuples"""
 
 from collections import namedtuple
 from pathlib import Path

PyMPDATA/impl/traversals.py

@@ -1,4 +1,4 @@
-""" staggered-grid traversals orchestration """
+"""staggered-grid traversals orchestration"""
 
 from collections import namedtuple
 from pathlib import Path

PyMPDATA/impl/traversals_common.py

@@ -1,4 +1,4 @@
-""" commons for scalar and vector field traversals """
+"""commons for scalar and vector field traversals"""
 
 # pylint: disable=too-many-arguments,line-too-long,unused-argument
 import numba

PyMPDATA/impl/traversals_halos_scalar.py

@@ -1,4 +1,4 @@
-""" halo-filling logic for scalar field traversals (incl. multi-threading) """
+"""halo-filling logic for scalar field traversals (incl. multi-threading)"""
 
 # pylint: disable=too-many-arguments
 import numba

PyMPDATA/impl/traversals_halos_vector.py

@@ -1,4 +1,4 @@
-""" halo-filling logic for vector field traversals (incl. multi-threading) """
+"""halo-filling logic for vector field traversals (incl. multi-threading)"""
 
 # pylint: disable=too-many-statements,too-many-locals,too-many-lines,too-many-function-args,too-many-arguments
 

PyMPDATA/impl/traversals_scalar.py

@@ -1,4 +1,4 @@
-""" scalar field traversals (incl. multi-threading) """
+"""scalar field traversals (incl. multi-threading)"""
 
 import numba
 

PyMPDATA/impl/traversals_vector.py

@@ -1,4 +1,4 @@
-""" vector field traversals (incl. multi-threading) """
+"""vector field traversals (incl. multi-threading)"""
 
 import numba
 

PyMPDATA/stepper.py

@@ -1,4 +1,4 @@
-""" MPDATA iteration logic """
+"""MPDATA iteration logic"""
 
 import sys
 import warnings

examples/setup.py

@@ -1,4 +1,4 @@
-""" the magick behind ``pip install ...`` """
+"""the magick behind ``pip install ...``"""
 
 import os
 import re

tests/smoke_tests/jaruga_et_al_2015/test_boussinesq.py

@@ -1,6 +1,7 @@
-""" tests for buoyant-bubble test case from Fig. 3 in [Smolarkiewicz & Pudykiewicz
+"""tests for buoyant-bubble test case from Fig. 3 in [Smolarkiewicz & Pudykiewicz
 1992](https://doi.org/10.1175/1520-0469(1992)049%3C2082:ACOSLA%3E2.0.CO;2),
-as in libmpdata++ paper ([Jaruga et al. 2015](https://doi.org/10.5194/gmd-8-1005-2015), Fig. 19)"""
+as in libmpdata++ paper ([Jaruga et al. 2015](https://doi.org/10.5194/gmd-8-1005-2015), Fig. 19)
+"""
 
 # pylint: disable=missing-class-docstring,missing-function-docstring
 

tests/smoke_tests/timing/fixtures.py

@@ -1,4 +1,4 @@
-""" pytest fixtures for timing tests """
+"""pytest fixtures for timing tests"""
 
 import numba
 import pytest