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storage: Fix NPE at some tests. #TASK-6596 #1969

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storage: Fix NPE at some tests. #TASK-6596

storage: Fix NPE at some tests. #TASK-6596 #1969

Triggered via push July 24, 2024 17:51
@j-collj-coll
pushed 84af7c1
TASK-6596
Status Success
Total duration 13m 51s
Artifacts 1

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50 errors
HadoopVariantDBAdaptorNativeTest.testGetAllVariants_limit_skip_sorted_multi_regions[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.testNativeQuery[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.testArchiveIterator[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.testGetAllVariants_functionalScore[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.testGetAllVariants_region[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.testGetAllVariants_negatedGenotypes[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.testGetAllVariants_transcriptionAnnotationFlags[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.testGetAllVariants_conservationScoreWrongValue[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.testEmptyQuery[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.testReturnNoneFiles[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.testCombineGeneSoVariants[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.testGetAllVariants_conservationScore[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.testGetAllVariants_samples[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.testReturnNoneSamples[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.multiIterator[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.testCombineBtSo[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.testGetAllVariants_limit_skip[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.testGetSortedVariantsReverse[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.testGetAllVariants_functionalScore_wrongValue[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.testCombineGeneBtSoFlag[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.testCombineGeneBt[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.testCombineGeneSo[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.testGetAllVariants_studies[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.testReturnNoneStudies[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.testExcludeSamples[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.testIncludeSampleId[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.testGetAllVariants_functionalScore_wrongSource[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.testGetSortedVariantsDefault[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.rank_gene[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.testExcludeAnnotationParts[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.testGetAllVariants_negatedGenotypesMixed[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.testGetAllVariants_ct[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.groupBy_gene_limit_0[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.testGetAllVariants_clinicalSignificance[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.testGetAllVariants_populationFrequency[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.testGetAllVariants_cohorts_fail1[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.testExcludeStudies[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.testIncludeFormat[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.testGetAllVariants_genotypes_wrong_values[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.testExcludeFiles[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.testExcludeStats[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.testExcludeAnnotation[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.testGetAllVariants_missingAllele[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.testGetAllVariants_maf[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.testGetAllVariants_mgf[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.testExcludeChromosome[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.testGoQuery[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.testGetVariantsByType[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.testGetAllVariants_population_maf[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'
HadoopVariantDBAdaptorNativeTest.testGetAlVariants_polyphenSiftDescription[0]: opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/test/java/org/opencb/opencga/storage/hadoop/variant/adaptors/HadoopVariantDBAdaptorNativeTest.java#L1
Incompatible assembly change from 'GRCH38' to 'grch37'

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