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Merge pull request #2506 from opencb/TASK-6879-dev #1007

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Merge pull request #2506 from opencb/TASK-6879-dev

Merge pull request #2506 from opencb/TASK-6879-dev #1007

Re-run triggered September 19, 2024 10:16
@juanfeSanahujajuanfeSanahuja
1f818cb
develop
Status Success
Total duration 15m 18s
Artifacts 1

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400 errors
ClinicalInterpretationAnalysisTest.: opencga-analysis/src/test/java/org/opencb/opencga/analysis/clinical/ClinicalInterpretationAnalysisTest.java#L78
Error computing pedigree graph for family family
ExomiserInterpretationAnalysisTest.: opencga-analysis/src/test/java/org/opencb/opencga/analysis/clinical/exomiser/ExomiserInterpretationAnalysisTest.java#L51
Error computing pedigree graph for family family
FamilyAnalysisTest.: opencga-analysis/src/test/java/org/opencb/opencga/analysis/family/FamilyAnalysisTest.java#L83
Error computing pedigree graph for family Martinez-Martinez
VariantAnalysisTest.testCohortStatsIndex[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testHRDetectParseResults[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testVariantStatsTwoCohorts[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testCellbaseConfigure[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testPedigreeGraph[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testVariantStats[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testGwas[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testVariantStatsWithFilter[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testKnockoutGenesByBiotype[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testClinicalAnalysisLoading[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testHRDetect[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testMalformedVcfFileIndex[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testSampleStats[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testExportTped[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testGwasByPhenotype[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testMutationalSignatureFittingSNV[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testKnockoutGenesSpecificGenesAndBiotypeProteinCoding[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testCohortStats[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testKnockoutGenesSpecificGenesAndBiotypeNMD[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testSampleStatsSampleFilter[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testExportVep[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testExport[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testSampleMultiVariantFilterAnalysis[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testMutationalSignatureFittingSV[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testMutationalSignatureCatalogueSV[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testKnockoutGenes[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testKnockoutGenesSpecificGenes[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantCatalogQueryUtilsTest.: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantCatalogQueryUtilsTest.java#L149
Error computing pedigree graph for family f1
VariantOperationsTest.testCellbaseConfigure[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantFileReload[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testGwasIndex[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondarySampleIndex[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondaryAnnotationIndex[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondarySampleIndexPartialFamily[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testCellbaseConfigure[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantFileReload[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testGwasIndex[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondarySampleIndex[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondaryAnnotationIndex[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondarySampleIndexPartialFamily[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
ClinicalAnalysisManagerTest.deleteClinicalAnalysisWithEmptyInterpretations: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2635
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.createClinicalAnalysisWithPanels: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2832
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.searchClinicalAnalysisByProband: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2567
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.updatePrimarySecondaryLockedInterpretationTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2359
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.updateCustomConsentTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L1733
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.createAndTestStatusIdIsNotNull: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L198
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.updateInterpretationFindingsTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L1918
Error computing pedigree graph for family family
ClinicalInterpretationAnalysisTest.: opencga-analysis/src/test/java/org/opencb/opencga/analysis/clinical/ClinicalInterpretationAnalysisTest.java#L78
Error computing pedigree graph for family family
ExomiserInterpretationAnalysisTest.: opencga-analysis/src/test/java/org/opencb/opencga/analysis/clinical/exomiser/ExomiserInterpretationAnalysisTest.java#L51
Error computing pedigree graph for family family
FamilyAnalysisTest.: opencga-analysis/src/test/java/org/opencb/opencga/analysis/family/FamilyAnalysisTest.java#L83
Error computing pedigree graph for family Martinez-Martinez
VariantAnalysisTest.testCohortStatsIndex[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testHRDetectParseResults[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testVariantStatsTwoCohorts[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testCellbaseConfigure[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testPedigreeGraph[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testVariantStats[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testGwas[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testVariantStatsWithFilter[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testKnockoutGenesByBiotype[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testClinicalAnalysisLoading[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testHRDetect[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testMalformedVcfFileIndex[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testSampleStats[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testExportTped[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testGwasByPhenotype[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testMutationalSignatureFittingSNV[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testKnockoutGenesSpecificGenesAndBiotypeProteinCoding[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testCohortStats[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testKnockoutGenesSpecificGenesAndBiotypeNMD[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testSampleStatsSampleFilter[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testExportVep[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testExport[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testSampleMultiVariantFilterAnalysis[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testMutationalSignatureFittingSV[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testMutationalSignatureCatalogueSV[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testKnockoutGenes[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testKnockoutGenesSpecificGenes[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantCatalogQueryUtilsTest.: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantCatalogQueryUtilsTest.java#L149
Error computing pedigree graph for family f1
VariantOperationsTest.testCellbaseConfigure[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantFileReload[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testGwasIndex[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondarySampleIndex[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondaryAnnotationIndex[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondarySampleIndexPartialFamily[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testCellbaseConfigure[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantFileReload[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testGwasIndex[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondarySampleIndex[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondaryAnnotationIndex[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondarySampleIndexPartialFamily[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
ClinicalAnalysisManagerTest.deleteClinicalAnalysisWithEmptyInterpretations: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2635
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.createClinicalAnalysisWithPanels: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2832
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.searchClinicalAnalysisByProband: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2567
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.updatePrimarySecondaryLockedInterpretationTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2359
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.updateCustomConsentTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L1733
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.createAndTestStatusIdIsNotNull: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L198
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.updateInterpretationFindingsTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L1918
Error computing pedigree graph for family family
ClinicalInterpretationAnalysisTest.: opencga-analysis/src/test/java/org/opencb/opencga/analysis/clinical/ClinicalInterpretationAnalysisTest.java#L78
Error computing pedigree graph for family family
ExomiserInterpretationAnalysisTest.: opencga-analysis/src/test/java/org/opencb/opencga/analysis/clinical/exomiser/ExomiserInterpretationAnalysisTest.java#L51
Error computing pedigree graph for family family
FamilyAnalysisTest.: opencga-analysis/src/test/java/org/opencb/opencga/analysis/family/FamilyAnalysisTest.java#L83
Error computing pedigree graph for family Martinez-Martinez
VariantAnalysisTest.testCohortStatsIndex[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testHRDetectParseResults[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testVariantStatsTwoCohorts[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testCellbaseConfigure[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testPedigreeGraph[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testVariantStats[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testGwas[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testVariantStatsWithFilter[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testKnockoutGenesByBiotype[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testClinicalAnalysisLoading[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testHRDetect[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testMalformedVcfFileIndex[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testSampleStats[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testExportTped[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testGwasByPhenotype[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testMutationalSignatureFittingSNV[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testKnockoutGenesSpecificGenesAndBiotypeProteinCoding[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testCohortStats[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testKnockoutGenesSpecificGenesAndBiotypeNMD[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testSampleStatsSampleFilter[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testExportVep[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testExport[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testSampleMultiVariantFilterAnalysis[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testMutationalSignatureFittingSV[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testMutationalSignatureCatalogueSV[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testKnockoutGenes[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testKnockoutGenesSpecificGenes[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantCatalogQueryUtilsTest.: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantCatalogQueryUtilsTest.java#L149
Error computing pedigree graph for family f1
VariantOperationsTest.testCellbaseConfigure[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantFileReload[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testGwasIndex[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondarySampleIndex[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondaryAnnotationIndex[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondarySampleIndexPartialFamily[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testCellbaseConfigure[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantFileReload[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testGwasIndex[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondarySampleIndex[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondaryAnnotationIndex[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondarySampleIndexPartialFamily[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
ClinicalAnalysisManagerTest.deleteClinicalAnalysisWithEmptyInterpretations: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2635
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.createClinicalAnalysisWithPanels: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2832
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.searchClinicalAnalysisByProband: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2567
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.updatePrimarySecondaryLockedInterpretationTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2359
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.updateCustomConsentTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L1733
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.createAndTestStatusIdIsNotNull: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L198
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.updateInterpretationFindingsTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L1918
Error computing pedigree graph for family family
ClinicalInterpretationAnalysisTest.: opencga-analysis/src/test/java/org/opencb/opencga/analysis/clinical/ClinicalInterpretationAnalysisTest.java#L78
Error computing pedigree graph for family family
ExomiserInterpretationAnalysisTest.: opencga-analysis/src/test/java/org/opencb/opencga/analysis/clinical/exomiser/ExomiserInterpretationAnalysisTest.java#L51
Error computing pedigree graph for family family
FamilyAnalysisTest.: opencga-analysis/src/test/java/org/opencb/opencga/analysis/family/FamilyAnalysisTest.java#L83
Error computing pedigree graph for family Martinez-Martinez
VariantAnalysisTest.testCohortStatsIndex[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testHRDetectParseResults[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testVariantStatsTwoCohorts[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testCellbaseConfigure[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testPedigreeGraph[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testVariantStats[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testGwas[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testVariantStatsWithFilter[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testKnockoutGenesByBiotype[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testClinicalAnalysisLoading[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testHRDetect[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testMalformedVcfFileIndex[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testSampleStats[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testExportTped[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testGwasByPhenotype[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testMutationalSignatureFittingSNV[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testKnockoutGenesSpecificGenesAndBiotypeProteinCoding[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testCohortStats[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testKnockoutGenesSpecificGenesAndBiotypeNMD[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testSampleStatsSampleFilter[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testExportVep[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testExport[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testSampleMultiVariantFilterAnalysis[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testMutationalSignatureFittingSV[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testMutationalSignatureCatalogueSV[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testKnockoutGenes[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testKnockoutGenesSpecificGenes[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantCatalogQueryUtilsTest.: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantCatalogQueryUtilsTest.java#L149
Error computing pedigree graph for family f1
VariantOperationsTest.testCellbaseConfigure[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantFileReload[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testGwasIndex[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondarySampleIndex[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondaryAnnotationIndex[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondarySampleIndexPartialFamily[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testCellbaseConfigure[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantFileReload[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testGwasIndex[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondarySampleIndex[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondaryAnnotationIndex[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondarySampleIndexPartialFamily[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
ClinicalAnalysisManagerTest.deleteClinicalAnalysisWithEmptyInterpretations: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2635
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.createClinicalAnalysisWithPanels: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2832
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.searchClinicalAnalysisByProband: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2567
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.updatePrimarySecondaryLockedInterpretationTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2359
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.updateCustomConsentTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L1733
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.createAndTestStatusIdIsNotNull: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L198
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.updateInterpretationFindingsTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L1918
Error computing pedigree graph for family family
ClinicalInterpretationAnalysisTest.: opencga-analysis/src/test/java/org/opencb/opencga/analysis/clinical/ClinicalInterpretationAnalysisTest.java#L78
Error computing pedigree graph for family family
ExomiserInterpretationAnalysisTest.: opencga-analysis/src/test/java/org/opencb/opencga/analysis/clinical/exomiser/ExomiserInterpretationAnalysisTest.java#L51
Error computing pedigree graph for family family
FamilyAnalysisTest.: opencga-analysis/src/test/java/org/opencb/opencga/analysis/family/FamilyAnalysisTest.java#L83
Error computing pedigree graph for family Martinez-Martinez
VariantAnalysisTest.testCohortStatsIndex[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testHRDetectParseResults[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testVariantStatsTwoCohorts[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testCellbaseConfigure[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testPedigreeGraph[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testVariantStats[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testGwas[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testVariantStatsWithFilter[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testKnockoutGenesByBiotype[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testClinicalAnalysisLoading[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testHRDetect[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testMalformedVcfFileIndex[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testSampleStats[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testExportTped[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testGwasByPhenotype[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testMutationalSignatureFittingSNV[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testKnockoutGenesSpecificGenesAndBiotypeProteinCoding[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testCohortStats[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testKnockoutGenesSpecificGenesAndBiotypeNMD[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testSampleStatsSampleFilter[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testExportVep[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testExport[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testSampleMultiVariantFilterAnalysis[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testMutationalSignatureFittingSV[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testMutationalSignatureCatalogueSV[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testKnockoutGenes[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testKnockoutGenesSpecificGenes[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantCatalogQueryUtilsTest.: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantCatalogQueryUtilsTest.java#L149
Error computing pedigree graph for family f1
VariantOperationsTest.testCellbaseConfigure[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantFileReload[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testGwasIndex[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondarySampleIndex[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondaryAnnotationIndex[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondarySampleIndexPartialFamily[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testCellbaseConfigure[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantFileReload[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testGwasIndex[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondarySampleIndex[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondaryAnnotationIndex[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondarySampleIndexPartialFamily[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
ClinicalAnalysisManagerTest.deleteClinicalAnalysisWithEmptyInterpretations: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2635
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.createClinicalAnalysisWithPanels: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2832
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.searchClinicalAnalysisByProband: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2567
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.updatePrimarySecondaryLockedInterpretationTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2359
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.updateCustomConsentTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L1733
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.createAndTestStatusIdIsNotNull: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L198
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.updateInterpretationFindingsTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L1918
Error computing pedigree graph for family family
ClinicalInterpretationAnalysisTest.: opencga-analysis/src/test/java/org/opencb/opencga/analysis/clinical/ClinicalInterpretationAnalysisTest.java#L78
Error computing pedigree graph for family family
ExomiserInterpretationAnalysisTest.: opencga-analysis/src/test/java/org/opencb/opencga/analysis/clinical/exomiser/ExomiserInterpretationAnalysisTest.java#L51
Error computing pedigree graph for family family
FamilyAnalysisTest.: opencga-analysis/src/test/java/org/opencb/opencga/analysis/family/FamilyAnalysisTest.java#L83
Error computing pedigree graph for family Martinez-Martinez
VariantAnalysisTest.testCohortStatsIndex[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testHRDetectParseResults[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testVariantStatsTwoCohorts[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testCellbaseConfigure[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testPedigreeGraph[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testVariantStats[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testGwas[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testVariantStatsWithFilter[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testKnockoutGenesByBiotype[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testClinicalAnalysisLoading[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testHRDetect[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testMalformedVcfFileIndex[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testSampleStats[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testExportTped[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testGwasByPhenotype[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testMutationalSignatureFittingSNV[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testKnockoutGenesSpecificGenesAndBiotypeProteinCoding[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testCohortStats[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testKnockoutGenesSpecificGenesAndBiotypeNMD[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testSampleStatsSampleFilter[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testExportVep[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testExport[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testSampleMultiVariantFilterAnalysis[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testMutationalSignatureFittingSV[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testMutationalSignatureCatalogueSV[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testKnockoutGenes[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testKnockoutGenesSpecificGenes[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantCatalogQueryUtilsTest.: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantCatalogQueryUtilsTest.java#L149
Error computing pedigree graph for family f1
VariantOperationsTest.testCellbaseConfigure[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantFileReload[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testGwasIndex[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondarySampleIndex[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondaryAnnotationIndex[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondarySampleIndexPartialFamily[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testCellbaseConfigure[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantFileReload[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testGwasIndex[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondarySampleIndex[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondaryAnnotationIndex[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondarySampleIndexPartialFamily[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
ClinicalAnalysisManagerTest.deleteClinicalAnalysisWithEmptyInterpretations: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2635
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.createClinicalAnalysisWithPanels: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2832
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.searchClinicalAnalysisByProband: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2567
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.updatePrimarySecondaryLockedInterpretationTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2359
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.updateCustomConsentTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L1733
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.createAndTestStatusIdIsNotNull: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L198
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.updateInterpretationFindingsTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L1918
Error computing pedigree graph for family family
ClinicalInterpretationAnalysisTest.: opencga-analysis/src/test/java/org/opencb/opencga/analysis/clinical/ClinicalInterpretationAnalysisTest.java#L78
Error computing pedigree graph for family family
ExomiserInterpretationAnalysisTest.: opencga-analysis/src/test/java/org/opencb/opencga/analysis/clinical/exomiser/ExomiserInterpretationAnalysisTest.java#L51
Error computing pedigree graph for family family
FamilyAnalysisTest.: opencga-analysis/src/test/java/org/opencb/opencga/analysis/family/FamilyAnalysisTest.java#L83
Error computing pedigree graph for family Martinez-Martinez
VariantAnalysisTest.testCohortStatsIndex[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testHRDetectParseResults[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testVariantStatsTwoCohorts[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testCellbaseConfigure[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testPedigreeGraph[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testVariantStats[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testGwas[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testVariantStatsWithFilter[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testKnockoutGenesByBiotype[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testClinicalAnalysisLoading[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testHRDetect[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testMalformedVcfFileIndex[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testSampleStats[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testExportTped[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testGwasByPhenotype[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testMutationalSignatureFittingSNV[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testKnockoutGenesSpecificGenesAndBiotypeProteinCoding[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testCohortStats[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testKnockoutGenesSpecificGenesAndBiotypeNMD[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testSampleStatsSampleFilter[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testExportVep[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testExport[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testSampleMultiVariantFilterAnalysis[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testMutationalSignatureFittingSV[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testMutationalSignatureCatalogueSV[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testKnockoutGenes[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testKnockoutGenesSpecificGenes[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantCatalogQueryUtilsTest.: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantCatalogQueryUtilsTest.java#L149
Error computing pedigree graph for family f1
VariantOperationsTest.testCellbaseConfigure[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantFileReload[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testGwasIndex[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondarySampleIndex[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondaryAnnotationIndex[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondarySampleIndexPartialFamily[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testCellbaseConfigure[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantFileReload[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testGwasIndex[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondarySampleIndex[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondaryAnnotationIndex[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondarySampleIndexPartialFamily[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
ClinicalAnalysisManagerTest.deleteClinicalAnalysisWithEmptyInterpretations: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2635
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.createClinicalAnalysisWithPanels: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2832
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.searchClinicalAnalysisByProband: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2567
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.updatePrimarySecondaryLockedInterpretationTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2359
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.updateCustomConsentTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L1733
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.createAndTestStatusIdIsNotNull: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L198
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.updateInterpretationFindingsTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L1918
Error computing pedigree graph for family family
ClinicalInterpretationAnalysisTest.: opencga-analysis/src/test/java/org/opencb/opencga/analysis/clinical/ClinicalInterpretationAnalysisTest.java#L78
Error computing pedigree graph for family family
ExomiserInterpretationAnalysisTest.: opencga-analysis/src/test/java/org/opencb/opencga/analysis/clinical/exomiser/ExomiserInterpretationAnalysisTest.java#L51
Error computing pedigree graph for family family
FamilyAnalysisTest.: opencga-analysis/src/test/java/org/opencb/opencga/analysis/family/FamilyAnalysisTest.java#L83
Error computing pedigree graph for family Martinez-Martinez
VariantAnalysisTest.testCohortStatsIndex[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testHRDetectParseResults[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testVariantStatsTwoCohorts[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testCellbaseConfigure[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testPedigreeGraph[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testVariantStats[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testGwas[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testVariantStatsWithFilter[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testKnockoutGenesByBiotype[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testClinicalAnalysisLoading[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testHRDetect[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testMalformedVcfFileIndex[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testSampleStats[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testExportTped[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testGwasByPhenotype[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testMutationalSignatureFittingSNV[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testKnockoutGenesSpecificGenesAndBiotypeProteinCoding[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testCohortStats[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testKnockoutGenesSpecificGenesAndBiotypeNMD[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testSampleStatsSampleFilter[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testExportVep[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testExport[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testSampleMultiVariantFilterAnalysis[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testMutationalSignatureFittingSV[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testMutationalSignatureCatalogueSV[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testKnockoutGenes[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantAnalysisTest.testKnockoutGenesSpecificGenes[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java#L226
Error computing pedigree graph for family f1
VariantCatalogQueryUtilsTest.: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantCatalogQueryUtilsTest.java#L149
Error computing pedigree graph for family f1
VariantOperationsTest.testCellbaseConfigure[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantFileReload[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testGwasIndex[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondarySampleIndex[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondaryAnnotationIndex[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondarySampleIndexPartialFamily[dummy]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testCellbaseConfigure[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantFileReload[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testGwasIndex[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondarySampleIndex[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondaryAnnotationIndex[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
VariantOperationsTest.testVariantSecondarySampleIndexPartialFamily[hadoop]: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L140
Error computing pedigree graph for family f1
ClinicalAnalysisManagerTest.deleteClinicalAnalysisWithEmptyInterpretations: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2635
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.createClinicalAnalysisWithPanels: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2832
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.searchClinicalAnalysisByProband: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2567
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.updatePrimarySecondaryLockedInterpretationTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2359
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.updateCustomConsentTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L1733
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.createAndTestStatusIdIsNotNull: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L198
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.updateInterpretationFindingsTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L1918
Error computing pedigree graph for family family

Artifacts

Produced during runtime
Name Size
build-folder
914 MB