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cicd: uncomment code commented for fix failed release #TASK-6185 #949

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cicd: uncomment code commented for fix failed release #TASK-6185

cicd: uncomment code commented for fix failed release #TASK-6185 #949

Triggered via push May 21, 2024 12:38
@juanfeSanahujajuanfeSanahuja
pushed d326fa5
develop
Status Failure
Total duration 2h 12m 9s
Artifacts 1

develop.yml

on: push
build  /  Build Java app
4m 48s
build / Build Java app
test  /  Execute Sonar Analysis
8m 41s
test / Execute Sonar Analysis
test  /  Execute JUnit and Jacoco tests
1h 36m
test / Execute JUnit and Jacoco tests
deploy-docker  /  Push Docker image
deploy-docker / Push Docker image
deploy-maven  /  Deploy to Maven and GitHub Packages
deploy-maven / Deploy to Maven and GitHub Packages
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51 errors
ClinicalInterpretationAnalysisTest.: opencga-analysis/src/test/java/org/opencb/opencga/analysis/clinical/ClinicalInterpretationAnalysisTest.java#L77
Error computing pedigree graph for family family
ExomiserInterpretationAnalysisTest.: opencga-analysis/src/test/java/org/opencb/opencga/analysis/clinical/exomiser/ExomiserInterpretationAnalysisTest.java#L47
Error computing pedigree graph for family family
FamilyAnalysisTest.: opencga-analysis/src/test/java/org/opencb/opencga/analysis/family/FamilyAnalysisTest.java#L83
Error computing pedigree graph for family Martinez-Martinez
VariantCatalogQueryUtilsTest.: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantCatalogQueryUtilsTest.java#L149
Error computing pedigree graph for family f1
ClinicalAnalysisManagerTest.deleteClinicalAnalysisWithEmptyInterpretations: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2635
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.createClinicalAnalysisWithPanels: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2832
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.searchClinicalAnalysisByProband: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2567
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.updatePrimarySecondaryLockedInterpretationTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2359
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.updateCustomConsentTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L1733
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.createAndTestStatusIdIsNotNull: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L198
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.updateInterpretationFindingsTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L1918
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.deleteLockedClinicalAnalysis: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2730
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.searchInterpretationVersion: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2036
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.createClinicalAnalysisTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L1549
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.assignPermissions: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L1458
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.updateCustomPriorityTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L1623
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.testSearchAnnotation: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L3939
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.updateClinicalAnalysisResponsible: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L349
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.updateClinicalAnalysisTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L1580
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.updateInterpretationTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2171
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.sampleNotFoundInMember: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L3018
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.deleteClinicalAnalysisWithInterpretations: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2670
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.searchByInternalAnnotationSetTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L3852
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.updateClinicalAnalystsTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L260
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.checkMoreThanOneSample: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L3048
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.searchByDisorderTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2754
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.updateClinicalAnalysisReport: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L376
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.clearSecondaryInterpretation: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L1879
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.loadClinicalAnalysesTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L3811
expected:<1> but was:<3>
ClinicalAnalysisManagerTest.queryClinicalAnalysisByDate: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L684
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.deleteClinicalAnalysisTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2618
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.updateClinicalAnalysisReportWithActions: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L451
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.updateCustomStatusTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L1601
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.createInterpretationWithPanels: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2866
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.checkFamilyMembersOrder: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2796
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.clearPrimaryInterpretation: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L1840
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.revertInterpretationVersion: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2078
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.updateDisorder: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2773
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.updateInterpretationCustomStatusTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L1770
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.updatePanelsInClinicalAnalysis: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2885
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.createInterpretationTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L1788
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.updateClinicalAnalysisRequest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L312
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.updateCustomFlagTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L1646
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.deleteInterpretationTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2509
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.testQueriesInFamilyCase: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2923
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.createMultipleCasesSameFamily: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L231
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.searchClinicalAnalysisByStatus: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2580
Error computing pedigree graph for family family
ClinicalAnalysisManagerTest.createClinicalWithMissingSamplesInFamily: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L749
Error computing pedigree graph for family family
FamilyManagerTest.updateDeleteInUseInCATest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/FamilyManagerTest.java#L1381
Error computing pedigree graph for family family1
FamilyManagerTest.updateInUseInCATest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/FamilyManagerTest.java#L1340
Error computing pedigree graph for family family1
test / Execute JUnit and Jacoco tests
There were 82 failed tests

Artifacts

Produced during runtime
Name Size
build-folder Expired
950 MB