Merge branch 'TASK-6445' of github.com:opencb/opencga into TASK-6445

opencb · Sep 27, 2024 · cb9828d · cb9828d
2 parents 16f35e7 + fa96ec4
commit cb9828d
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diff --git a/opencga-app/app/cloud/docker/opencga-nextflow/Dockerfile b/opencga-app/app/cloud/docker/opencga-nextflow/Dockerfile
diff --git a/opencga-app/app/cloud/docker/opencga-workflow/Dockerfile b/opencga-app/app/cloud/docker/opencga-workflow/Dockerfile
@@ -37,7 +37,7 @@ COPY --chown=opencga:opencga ${BUILD_PATH} ${OPENCGA_HOME}
 
 ## 2. Based on base
 FROM base
-RUN apt-get update && apt-get -y upgrade && apt-get install -y python3 python3-pip bcftools && \
+RUN apt-get update && apt-get -y upgrade && apt-get install -y python3 python3-pip r-base samtools bcftools && \
     pip3 install ${OPENCGA_HOME}/clients/python && \
     ## Clean downloaded packages to make images smaller
     rm -rf /var/lib/apt/lists/*