storage: Fix canUseThisExecutor on SampleIndexOnlyVariantQueryExecuto…

…r #TASK-6436
opencb · Jun 28, 2024 · e95bae4 · e95bae4
1 parent f3ac930
commit e95bae4
Showing 1 changed file with 2 additions and 4 deletions.
diff --git a/.../org/opencb/opencga/storage/hadoop/variant/index/SampleIndexOnlyVariantQueryExecutor.java b/.../org/opencb/opencga/storage/hadoop/variant/index/SampleIndexOnlyVariantQueryExecutor.java
@@ -180,13 +180,11 @@ protected boolean shouldGetCount(QueryOptions options, boolean iterator) {
     private boolean isFullyCoveredQuery(Query inputQuery, QueryOptions options) {
         Query query = new Query(inputQuery);
 
-        if (!isQueryCovered(query)) {
-            return false;
-        }
 //        ParsedVariantQuery parsedVariantQuery = variantQueryProjectionParser.parseQuery(query, options, true);
         SampleIndexQuery sampleIndexQuery = sampleIndexDBAdaptor.parseSampleIndexQuery(query);
 
-        return isIncludeCovered(sampleIndexQuery, inputQuery, options);
+        return isQueryCovered(sampleIndexQuery.getUncoveredQuery())
+                && isIncludeCovered(sampleIndexQuery, inputQuery, options);
     }
 
     private boolean isQueryCovered(Query query) {