TASK-4144 Fix structural variation (SV) catalogue counting in signature analysis #2310
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jtarraga
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j-coll
requested changes
Jul 3, 2023
...b/opencga/analysis/variant/mutationalSignature/MutationalSignatureLocalAnalysisExecutor.java
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...b/opencga/analysis/variant/mutationalSignature/MutationalSignatureLocalAnalysisExecutor.java
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| // Write catalogue file from the genome context counts | ||
| PrintWriter pw = new PrintWriter(getOutDir().resolve(CATALOGUES_FILENAME_DEFAULT).toFile()); | ||
| // Write catalogue file from the genome context counts | ||
| try (PrintWriter pw = new PrintWriter(getOutDir().resolve(CATALOGUES_FILENAME_DEFAULT).toFile())) { |
...b/opencga/analysis/variant/mutationalSignature/MutationalSignatureLocalAnalysisExecutor.java
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j-coll
approved these changes
Jul 4, 2023
This was referenced Jul 20, 2023
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Fix structural variation (SV) catalogue counting in signature analysis