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#1000 Skip broken datasets during load #1001

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merged 1 commit into from
Apr 4, 2024
Merged

#1000 Skip broken datasets during load #1001

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10 changes: 7 additions & 3 deletions datacube_ows/data.py
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Original file line number Diff line number Diff line change
Expand Up @@ -248,7 +248,7 @@ def data(self, datasets_by_query, skip_corrections=False):
if pbq.manual_merge:
qry_result = self.manual_data_stack(datasets, measurements, pbq.bands, skip_corrections, fuse_func=fuse_func)
else:
qry_result = self.read_data(datasets, measurements, self._geobox, self._resampling, fuse_func=fuse_func)
qry_result = self.read_data(datasets, measurements, self._geobox, resampling=self._resampling, fuse_func=fuse_func)
if data is None:
data = qry_result
continue
Expand Down Expand Up @@ -332,22 +332,25 @@ def manual_data_stack(self, datasets, measurements, bands, skip_corrections, fus
return result

# Read data for given datasets and measurements per the output_geobox
# TODO: Make skip_broken passed in via config
@log_call
def read_data(self, datasets, measurements, geobox, resampling=Resampling.nearest, fuse_func=None):
def read_data(self, datasets, measurements, geobox, skip_broken = True, resampling=Resampling.nearest, fuse_func=None):
CredentialManager.check_cred()
try:
return datacube.Datacube.load_data(
datasets,
geobox,
measurements=measurements,
fuse_func=fuse_func,
skip_broken_datasets=skip_broken,
patch_url=self._product.patch_url)
except Exception as e:
_LOG.error("Error (%s) in load_data: %s", e.__class__.__name__, str(e))
raise
# Read data for single datasets and measurements per the output_geobox
# TODO: Make skip_broken passed in via config
@log_call
def read_data_for_single_dataset(self, dataset, measurements, geobox, resampling=Resampling.nearest, fuse_func=None):
def read_data_for_single_dataset(self, dataset, measurements, geobox, skip_broken = True, resampling=Resampling.nearest, fuse_func=None):
datasets = [dataset]
dc_datasets = datacube.Datacube.group_datasets(datasets, self._product.time_resolution.dataset_groupby())
CredentialManager.check_cred()
Expand All @@ -357,6 +360,7 @@ def read_data_for_single_dataset(self, dataset, measurements, geobox, resampling
geobox,
measurements=measurements,
fuse_func=fuse_func,
skip_broken_datasets=skip_broken,
patch_url=self._product.patch_url)
except Exception as e:
_LOG.error("Error (%s) in load_data: %s", e.__class__.__name__, str(e))
Expand Down
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