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Fix #72
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wlandau committed Feb 8, 2024
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2 changes: 1 addition & 1 deletion DESCRIPTION
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Expand Up @@ -66,5 +66,5 @@ Config/testthat/edition: 3
Encoding: UTF-8
Language: en-US
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.0
RoxygenNote: 7.3.1
LazyData: true
21 changes: 11 additions & 10 deletions R/brm_package.R
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#' it supports a simplified interfaced to reduce difficulty
#' and align with the best practices of the life sciences.
#' @references
#' * Bürkner PC (2017). brms: An R Package for Bayesian
#' Multilevel Models Using Stan.
#'. J Stat Softw, 80(1), 1-28.
#' doi:10.18637/jss.v080.i01
#' * Mallinckrodt CH, Lane PW, Schnell D, et al (2008).
#' Recommendations for the Primary Analysis of Continuous Endpoints
#' in Longitudinal Clinical Trials.
#' * Bürkner, P.-C. (2017), "brms: An R package for Bayesian
#' multilevel models using Stan,"
#' Journal of Statistical Software, 80, 128.
#' https://doi.org/10.18637/jss.v080.i01.
#' * Mallinckrodt, C. H., Lane, P. W., Schnell, D., and others (2008),
#' "Recommendations for the primary analysis of continuous endpoints
#' in longitudinal clinical trials,"
#' Ther Innov Regul Sci, 42, 303–319.

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@chstock

chstock Feb 9, 2024

Collaborator

We now have "Journal of Statistical Software" and "Ther Innov Regul Sci". I suggest to consistently use either abbreviated or full journal names: "Journal of Statistical Software" and "Therapeutic Innovation & Regulatory Science", or "J Stat Softw" and "Ther Innov Regul Sci".

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@wlandau

wlandau Feb 9, 2024

Author Collaborator

Great point. 5d02652 changes "Ther Innov Regul Sci" to "Therapeutic Innovation and Regulatory Science".

#' doi:10.1177/009286150804200402
#' * Mallinckrodt C and Lipkovich I (2017). Analyzing Longitudinal Trial
#' Data -- A Practical Guide. Chapman `&` Hall/ CRC Biostatistics Series.
#' https://doi.org/10.1177/009286150804200402.
#' * Mallinckrodt, C. H., and Lipkovich, I. (2017),
#' Analyzing longitudinal clinical trial data: A practical guide,
#' CRC Press, Taylor & Francis Group.
#' @family help
#' @importFrom brms brm brmsformula get_prior prior unstr
#' @importFrom coda as.mcmc
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8 changes: 8 additions & 0 deletions inst/bibliography.bib
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doi={10.1177/009286150804200402}
}

@book{
mallinckrodt2017,
title={Analyzing Longitudinal Clinical Trial Data: A Practical Guide},
author={Mallinckrodt, C.H. and Lipkovich, Ilya},
year={2017},
publisher={CRC Press, Taylor & Francis Group}
}

@article{
lenth2016,
title={Least-Squares Means: The R Package lsmeans},
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2 changes: 1 addition & 1 deletion man/brm_marginal_data.Rd

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21 changes: 11 additions & 10 deletions man/brms.mmrm-package.Rd

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2 changes: 1 addition & 1 deletion vignettes/methods.Rmd
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%\VignetteEncoding{UTF-8}
---

The `brms.mmrm` R package implements a mixed model of repeated measures (MMRM) [@mallinckrodt2008], a popular and flexible model to analyze continuous longitudinal outcomes. `brms.mmrm` focuses on marginal MMRMs for randomized controlled parallel studies with discrete time points, where each subject shares the same set of time points. Whereas the [`mmrm`](https://openpharma.github.io/mmrm/) package is frequentist, `brms.mmrm` fits models in Bayesian fashion using [`brms`](https://paul-buerkner.github.io/brms/) [@burkner2017].
The `brms.mmrm` R package implements a mixed model of repeated measures (MMRM), a popular and flexible model to analyze continuous longitudinal outcomes (@mallinckrodt2008, @mallinckrodt2017). `brms.mmrm` focuses on marginal MMRMs for randomized controlled parallel studies with discrete time points, where each subject shares the same set of time points. Whereas the [`mmrm`](https://openpharma.github.io/mmrm/) package is frequentist, `brms.mmrm` fits models in Bayesian fashion using [`brms`](https://paul-buerkner.github.io/brms/) [@burkner2017].

# Model

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