fix actions

openproblems-bio · Sep 4, 2024 · b5dd28b · b5dd28b
1 parent e0c7312
commit b5dd28b
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Showing 3 changed files with 15 additions and 187 deletions.
diff --git a/.github/workflows/integration-test.yml b/.github/workflows/integration-test.yml
diff --git a/.github/workflows/main-build.yml b/.github/workflows/main-build.yml
@@ -11,7 +11,6 @@ jobs:
 
     outputs:
       component_matrix: ${{ steps.set_matrix.outputs.matrix }}
-      cache_key: ${{ steps.cache.outputs.cache_key }}
 
     steps:
     - uses: actions/checkout@v4
@@ -28,22 +27,6 @@ jobs:
         config_mod: .functionality.version := 'main_build'
         parallel: true
 
-    # - name: Build nextflow schemas
-    #   uses: viash-io/viash-actions/pro/build-nextflow-schemas@v4
-    #   with:
-    #     workflows: src
-    #     components: src
-    #     viash_pro_token: ${{ secrets.GTHB_PAT }}
-    #     tools_version: 'main_build'
-
-    # - name: Build parameter files
-    #   uses: viash-io/viash-actions/pro/build-nextflow-params@v4
-    #   with:
-    #     workflows: src
-    #     components: src
-    #     viash_pro_token: ${{ secrets.GTHB_PAT }}
-    #     tools_version: 'main_build'
-
     - name: Deploy to target branch
       uses: peaceiris/actions-gh-pages@v4
       with:
@@ -73,6 +56,10 @@ jobs:
 
     runs-on: ubuntu-latest
 
+    permissions:
+      contents: read
+      packages: write
+
     strategy:
       fail-fast: false
       matrix:
@@ -93,13 +80,13 @@ jobs:
         platform: docker
         src: ${{ matrix.component.dir }}
         setup: build
-        
+
     - name: Login to container registry
       uses: docker/login-action@v3
       with:
         registry: ghcr.io
-        username: ${{ secrets.GTHB_USER }}
-        password: ${{ secrets.GTHB_PAT }}
+        username: ${{ github.actor }}
+        password: ${{ secrets.GITHUB_TOKEN }}
 
     - name: Push container
       uses: viash-io/viash-actions/ns-build@v5

diff --git a/.github/workflows/release-build.yml b/.github/workflows/release-build.yml
@@ -102,6 +102,10 @@ jobs:
 
     runs-on: ubuntu-latest
 
+    permissions:
+      contents: read
+      packages: write
+
     strategy:
       fail-fast: false
       matrix:
@@ -122,13 +126,13 @@ jobs:
         platform: docker
         src: ${{ matrix.component.dir }}
         setup: build
-        
+
     - name: Login to container registry
       uses: docker/login-action@v3
       with:
         registry: ghcr.io
-        username: ${{ secrets.GTHB_USER }}
-        password: ${{ secrets.GTHB_PAT }}
+        username: ${{ github.actor }}
+        password: ${{ secrets.GITHUB_TOKEN }}
 
     - name: Push container
       uses: viash-io/viash-actions/ns-build@v5
@@ -192,7 +196,7 @@ jobs:
   # phase 4
   component_test:
     needs: [ build, list ]
-    if: ${{ needs.list.outputs.matrix != '[]' && needs.list.outputs.matrix != '' }}
+    if: ${{ needs.list.outputs.component_matrix != '[]' && needs.list.outputs.component_matrix != '' }}
     runs-on: ubuntu-latest
 
     strategy: