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small changes to metrics #208

small changes to metrics

small changes to metrics #208

Workflow file for this run

# name: Build
# on:
# push:
# branches: [ 'main' ]
# workflow_dispatch:
# inputs:
# version:
# description: |
# The version of the project to build. Example: `1.0.3`.
# If not provided, a development build with a version name
# based on the branch name will be built. Otherwise, a release
# build with the provided version will be built.
# required: false
# jobs:
# build:
# uses: openproblems-bio/actions/.github/workflows/build.yml@main
# with:
# version: ${{ github.event.inputs.version }}
name: build
on:
push:
branches: [ 'main' ]
workflow_dispatch:
inputs:
target_branch:
description: 'Branch to deploy to. If not specified, `build-${BRANCH_NAME}` will be used.'
required: false
version:
description: 'Version name to use for the build. If not specified, `build-${BRANCH_NAME}` will be used.'
required: false
jobs:
# phase 1
list:
runs-on: ubuntu-latest
outputs:
target_branch: ${{ steps.defaults.outputs.target_branch }}
version: ${{ steps.defaults.outputs.version }}
component_matrix: ${{ steps.set_matrix.outputs.matrix }}
steps:
- uses: actions/checkout@v4
- uses: viash-io/viash-actions/setup@v6
- name: Determine version tag from branch name
id: defaults
run: |
BRANCH_NAME=$(echo $GITHUB_REF | sed 's/refs\/heads\///')
VERSION=${{ github.event.inputs.version }}
if [ -z "$VERSION" ]; then
VERSION="build-$BRANCH_NAME"
fi
echo "version=$VERSION" >> $GITHUB_OUTPUT
TARGET_BRANCH=${{ github.event.inputs.target_branch }}
if [ -z "$TARGET_BRANCH" ]; then
TARGET_BRANCH="build/$BRANCH_NAME"
fi
echo "target_branch=$TARGET_BRANCH" >> $GITHUB_OUTPUT
- name: Remove target folder from .gitignore
run: |
# allow publishing the target folder
sed -i '/^target.*/d' .gitignore
- uses: viash-io/viash-actions/ns-build@v6
with:
config_mod: .functionality.version := '${{ steps.defaults.outputs.version }}'
parallel: true
- name: Deploy to target branch
uses: peaceiris/actions-gh-pages@v4
with:
github_token: ${{ secrets.GITHUB_TOKEN }}
publish_dir: .
publish_branch: ${{ steps.defaults.outputs.target_branch }}
- id: ns_list
uses: viash-io/viash-actions/ns-list@v6
with:
platform: docker
src: src
format: json
- id: set_matrix
run: |
echo "matrix=$(jq -c '[ .[] |
{
"name": (.functionality.namespace + "/" + .functionality.name),
"dir": .info.config | capture("^(?<dir>.*\/)").dir
}
]' ${{ steps.ns_list.outputs.output_file }} )" >> $GITHUB_OUTPUT
# phase 2
build:
needs: list
runs-on: ubuntu-latest
permissions:
contents: read
packages: write
strategy:
fail-fast: false
matrix:
component: ${{ fromJson(needs.list.outputs.component_matrix) }}
steps:
# Remove unnecessary files to free up space. Otherwise, we get 'no space left on device.'
- uses: data-intuitive/reclaim-the-bytes@v2
- uses: actions/checkout@v4
- uses: viash-io/viash-actions/setup@v6
- name: Build container
uses: viash-io/viash-actions/ns-build@v6
with:
config_mod: .functionality.version := '${{ needs.list.outputs.version }}'
platform: docker
src: ${{ matrix.component.dir }}
setup: build
- name: Login to container registry
uses: docker/login-action@v3
with:
registry: ghcr.io
username: ${{ github.actor }}
password: ${{ secrets.GITHUB_TOKEN }}
- name: Push container
uses: viash-io/viash-actions/ns-build@v6
with:
config_mod: .functionality.version := '${{ needs.list.outputs.version }}'
platform: docker
src: ${{ matrix.component.dir }}
setup: push