Merge branch 'master' into early-aug-ck

.github/workflows/build-client-container.yml

@@ -19,7 +19,7 @@ jobs:
     steps:
     - name: make date tag
       id: mkdatetag
-      run: echo "::set-output name=dtag::$(date +%Y%m%d-%H%M)"
+      run: echo "dtag=$(date +%Y%m%d-%H%M)" >> $GITHUB_OUTPUT
 
   build:
     runs-on: ubuntu-latest
@@ -29,7 +29,7 @@ jobs:
       fail-fast: False
 
     steps:
-    - uses: actions/checkout@v2
+    - uses: actions/checkout@v3
 
     - name: Generate tag list
       id: generate-tag-list
@@ -43,26 +43,26 @@ jobs:
           tag_list+=($registry/$docker_repo:release-$TIMESTAMP)
         done
         IFS=,
-        echo "::set-output name=taglist::${tag_list[*]}"
+        echo "taglist=${tag_list[*]}" >> $GITHUB_OUTPUT
 
     - name: Set up Docker Buildx
-      uses: docker/setup-buildx-action@v1
+      uses: docker/setup-buildx-action@v2.7.0
 
     - name: Log in to Docker Hub
-      uses: docker/login-action@v1
+      uses: docker/login-action@v2.2.0
       with:
         username: ${{ secrets.DOCKER_USERNAME }}
         password: ${{ secrets.DOCKER_PASSWORD }}
 
     - name: Log in to OSG Harbor
-      uses: docker/login-action@v1
+      uses: docker/login-action@v2.2.0
       with:
         registry: hub.opensciencegrid.org
         username: ${{ secrets.OSG_HARBOR_ROBOT_USER }}
         password: ${{ secrets.OSG_HARBOR_ROBOT_PASSWORD }}
 
     - name: Build and push Client Docker images
-      uses: docker/build-push-action@v2.2.0
+      uses: docker/build-push-action@v4
       with:
         push: true
         tags: "${{ steps.generate-tag-list.outputs.taglist }}"

.github/workflows/build-sw-container.yml

@@ -13,7 +13,7 @@ jobs:
     runs-on: ubuntu-latest
     if: startsWith(github.repository, 'opensciencegrid/')
     steps:
-    - uses: actions/checkout@v2
+    - uses: actions/checkout@v3
 
     - name: Generate tag list
       id: generate-tag-list
@@ -28,26 +28,26 @@ jobs:
         # This causes the tag_list array to be comma-separated below,
         # which is required for build-push-action
         IFS=,
-        echo "::set-output name=taglist::${tag_list[*]}"
+        echo "taglist=${tag_list[*]}" >> $GITHUB_OUTPUT
 
     - name: Set up Docker Buildx
-      uses: docker/setup-buildx-action@v1
+      uses: docker/setup-buildx-action@v2.7.0
 
     - name: Log in to Docker Hub
-      uses: docker/login-action@v1
+      uses: docker/login-action@v2.2.0
       with:
         username: ${{ secrets.DOCKER_USERNAME }}
         password: ${{ secrets.DOCKER_PASSWORD }}
 
     - name: Log in to OSG Harbor
-      uses: docker/login-action@v1
+      uses: docker/login-action@v2.2.0
       with:
         registry: hub.opensciencegrid.org
         username: ${{ secrets.OSG_HARBOR_ROBOT_USER }}
         password: ${{ secrets.OSG_HARBOR_ROBOT_PASSWORD }}
 
     - name: Build and push Docker images
-      uses: docker/build-push-action@v2.2.0
+      uses: docker/build-push-action@v4
       with:
         context: .
         push: true

.github/workflows/validate-caches.yml

@@ -10,9 +10,9 @@ jobs:
     if: startsWith(github.repository, 'opensciencegrid/')
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v2
+      - uses: actions/checkout@v3
       - name: Set up Python
-        uses: actions/setup-python@v2
+        uses: actions/setup-python@v4
         with:
           python-version: 3.9.15
       - name: Compare StashCache config lists

.github/workflows/validate-code.yml

@@ -6,9 +6,9 @@ jobs:
     name: Validate Topology code
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v2
+      - uses: actions/checkout@v3
       - name: Set up Python
-        uses: actions/setup-python@v2
+        uses: actions/setup-python@v4
         with:
           python-version: 3.9.15
       - name: Install packages

.github/workflows/validate-data.yml

@@ -7,9 +7,9 @@ jobs:
     name: Validate Topology data
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v2
+      - uses: actions/checkout@v3
       - name: Set up Python
-        uses: actions/setup-python@v2
+        uses: actions/setup-python@v4
         with:
           python-version: 3.9.15
       - name: Install packages

mappings/project_institution.yaml

@@ -10,6 +10,7 @@ BNL: "Brookhaven National Laboratory"
 BU: "Boston University"
 BYUI: "Brigham Young University Idaho"
 Caltech: "California Institute of Technology"
+CedarsSinai: "Cedars-Sinai Medical Center"
 Cincinnati: "University of Cincinnati"
 Clarkson: "Clarkson University"
 Coe: "Coe College"

projects/Auburn_Hauck.yaml

@@ -0,0 +1,9 @@
+Department: Pathobiology
+Description: Experimental infections with avian reovirus and co-infections with other micro-organisms. We analyze bioinformatic data pertaining to microbiome, gene expression, metagenome and transcriptome obtained from these experiments.
+FieldOfScience: Agricultural Sciences specifically Poultry Science
+Organization: Auburn University
+PIName: Ruediger Hauck
+
+Sponsor:
+  CampusGrid:
+    Name: OSG Connect

projects/BNL_Venugopalan.yaml

@@ -0,0 +1,7 @@
+Description: >
+  We investigate the dynamics of strongly interacting field theories through a variety of numerical methods, 
+  ranging from classical lattice simulations to tensor network projects.
+Department: Physics
+FieldOfScience: Physics
+Organization: Brookhaven National Laboratory
+PIName: Raju Venugopalan

projects/BrighamAndWomens_ Baratono.yaml

@@ -0,0 +1,5 @@
+Description: Studying how atrophy and connectivity to atrophy impacts cognitive and psychological outcomes in patients with a variety of neurodegenerative disorders
+Department: Neurology
+FieldOfScience: Biological and Biomedical Sciences
+Organization: Brigham and Women's Hospital
+PIName: Sheena R Baratono

projects/CSUN_Jiang.yaml

@@ -0,0 +1,9 @@
+Description: >
+  Wildfire Prediction for California using various remote sensing data from the past decades. 
+  This is a computation intensive research project that involves applying machine learning models for data analysis and prediction, 
+  and also computation-intensive work for data visualization. 
+  This project will involve collaborations from both internal and external students at California State University, Northridge.
+Department:  Computer Science
+FieldOfScience: Computer and Information Sciences
+Organization: California State University, Northridge
+PIName: Xunfei Jiang

projects/CSU_Buchanan.yaml

@@ -0,0 +1,5 @@
+Description: Modeling of magnetorheological elastomers
+Department: Physics
+FieldOfScience: Physics
+Organization: Colorado State University
+PIName: Kristen Buchanan

projects/Emory_Pesavento.yaml

@@ -0,0 +1,16 @@
+Department: Economics
+Description: >
+  The goal of our research project is to develop a new technique to estimate
+  impulse response functions in Time-varying-parameters vector autoregressive models
+  (in short: TVP-VARs). TVP-VARs are particularly useful because, unlike traditional
+  VAR models, they accounts for changing economic conditions by allowing parameters
+  to change over time. Estimating impulse responses (one of the main tools in
+  macroeconomic analysis) in a TVP-VAR requires the implementation of Markov Chain
+  Montecarlo algorithms (such as Gibbs sampling). This is a computationally demanding
+  task in a TVP-VAR framework, due to the huge number of parameters to estimate.
+  However, we could substantially ease such task by using parallel computing
+  techniques. In this way, we could provide policy makers with a more realistic
+  and flexible framework use to perform macroeconomic policy evaluation."
+FieldOfScience: Economics
+Organization: Emory University
+PIName: Elena Pesavento

projects/Etown_Wittmeyer.yaml

@@ -0,0 +1,9 @@
+Description: I am interested in examining experience-dependent neuroplasticity and individual differences in humans as it pertains to learning and memory.  In particular, I analyze structural magnetic resonance imaging (sMRI) data from various neuroimaging data-sharing platforms to explore changes in gray matter across learning and/or correlate learning performance with various cognitive and demographic factors.
+Department: Psychology
+FieldOfScience: Psychology and Life Sciences
+Organization: Elizabethtown College
+PIName: Jennifer Legault Wittmeyer
+
+Sponsor:
+  CampusGrid:
+    Name: OSG Connect

projects/FIU_Guo.yaml

@@ -0,0 +1,9 @@
+Description: >
+  My research in experimental nuclear physics requires large amounts of 
+  simulations. These simulations are independent of one another and the OSPool is 
+  very well suited for these tasks. Access to the OSG computing resources would be 
+  a useful asset for my research.
+Department: College of Arts and Science
+FieldOfScience: Physics
+Organization: Florida International University
+PIName: Lei Guo

projects/IIT_Rosa.yaml

@@ -0,0 +1,9 @@
+Description: "Generating trajectories in high-dimensional parameter spaces using numerical continuation methods.  The software repo is available here: https://github.com/nr-codes/BipedalGaitGeneration."
+Department: Mechanical, Materials, and Aerospace Engineering Deptartment
+FieldOfScience: Mechanical Engineering
+Organization: Illinois Institute of Technology
+PIName: Nelson Rosa
+
+Sponsor:
+  CampusGrid:
+    Name: OSG Connect

projects/IIT_Zhong.yaml

@@ -0,0 +1,9 @@
+Description: We conduct research on scientific machine learning, especially related to how machine learning can be used to learn and understand dynamical systems from observation data.  Right now, we are developing models to understand synchronization, i.e. how oscillators can be put in sync with spatial patterns.
+Department: Appleid Mathematics
+FieldOfScience: Appleid Mathematics
+Organization: Illinois Institute of Technology
+PIName: Ming Zhong
+
+Sponsor:
+  CampusGrid:
+    Name: OSG Connect

projects/NCSU_Gray.yaml

@@ -0,0 +1,9 @@
+Description: >
+  Map and characterize global change, and to understand the consequences of these changes for the Earth system and society. 
+  Anthropogenic changes to vegetation (e.g. cropping systems, deforestation, etc.) are of particular interest. 
+  Example research questions include: How can we feed a growing population without running out of water? 
+  Have tropical deforestation mitigation policies been effective? How is vegetation phenology changing in response to a changing climate?
+Department: Center for Geospatial Analytics
+FieldOfScience: Geosciences
+Organization: North Carolina State University
+PIName: Josh Gray

projects/NCSU_Staff.yaml

@@ -0,0 +1,7 @@
+Description: >
+  Continue my access to the OSPool after the OSG School to further 
+  support potential users and workflows for NC State University
+Department: Research Facilitation Service
+FieldOfScience: Other
+Organization: North Carolina State University
+PIName: Christopher Blanton

projects/ND_Chen.yaml

@@ -0,0 +1,5 @@
+Department: College of Engineering
+Description: Training AI models on public medical image data
+FieldOfScience: Engineering
+Organization: University of Notre Dame
+PIName: Danny Chen

projects/NMSU_Lawson.yaml

@@ -0,0 +1,9 @@
+Description: >
+  I am requesting an OSPool project for my postdoctoral research investigating 
+  drivers of population decline for the American Kestrel, a raptor species that breeds 
+  across North America. I plan to use OSG resources to compile my environmental data 
+  and fit statistical models.
+Department: Fish, Wildlife, and Conservation Ecology  
+FieldOfScience: Ecological and Environmental Sciences
+Organization: New Mexico State University
+PIName: Abigail Lawson

projects/SIUE_Quinones.yaml

@@ -0,0 +1,5 @@
+Description: Research in Computer Vision, Digital Image Processing, and Multi-Agent Simulation.
+Department: Computer Science
+FieldOfScience: Computer Science
+Organization: Southern Illinois University Edwardsville
+PIName: Rubi Quinones

projects/UCLA_Huang.yaml

@@ -0,0 +1,11 @@
+Description: Studying $\Omega$-hadron correlation to search for signatures of baryon junction mechanisms at RHIC BES energies.
+Department: Physics and Astronomy
+FieldOfScience: Astronomy
+Organization: Arizona State University
+PIName: Huan Zhong Huang
+
+ID: '731'
+
+Sponsor:
+  CampusGrid:
+    Name: OSG Connect

projects/UMiss_Gupta.yaml

@@ -0,0 +1,6 @@
+Department: LIGO
+Description: 'We are studying the evolution of binary black holes and it would be
+  great to try out the OS Pool facility through the AP40 cluster. '
+FieldOfScience: Astronomy and Astrophysics
+Organization: University of Mississippi
+PIName: Anuradha Gupta

projects/UNL_Hebets.yaml

@@ -0,0 +1,5 @@
+Description: Assess spider web structure by training and tracking models using SLEAP
+Department: Biological Sciences
+FieldOfScience: Biological Sciences
+Organization: University of Nebraska-Lincoln
+PIName: Eileen Hebets

projects/UTA_Jones.yaml

@@ -0,0 +1,7 @@
+Description: >
+  works on the NEXT neutrinoless double beta decay experiment: https://next.ific.uv.es/next/ which is an international collaboration. 
+  The experiment is trying to determine if the neutrino is its own anti-particle.
+Department: Physics
+FieldOfScience: Physics
+Organization: University of Texas at Arlington
+PIName: Ben Jones

projects/UTEP_Moore.yaml

@@ -0,0 +1,5 @@
+Description: We are developing portable containers for deep-learning frameworks and applications
+Department: Computer Science
+FieldOfScience: Computer and Information Services
+Organization: University of Texas at El Paso
+PIName: Shirley Moore

projects/UTSA_Anantua.yaml

@@ -0,0 +1,8 @@
+Description: >
+   I am using Monte Carlo ray-tracing code GRMONTY to create and
+   compare two different emission models R-Beta and Critical-Beta
+   of M87 and Sgr A*. https://richardanantua.com/spectra/
+Department: Department of Physics and Astronomy
+FieldOfScience: Astronomy and Astrophysics
+Organization: The University of Texas at San Antonio
+PIName: Richard Anantua

projects/UWMadison_Li.yaml

@@ -0,0 +1,5 @@
+Description: Multiscale modeling, computational materials design, mechanics and physics of polymers, and machine learning-accelerated polymer design.
+Department: Mechanical Engineering
+FieldOfScience: Engineering
+Organization: University of Wisconsin-Madison
+PIName: Ying Li

projects/UWMadison_Solis-Lemus.yaml

@@ -0,0 +1,7 @@
+Description: >
+  Using machine learning methods to identify sounds from audio recordings
+  in multiple regions of the world through time.
+Department: Plant Pathology
+FieldOfScience: Biological Sciences
+Organization: University of Wisconsin-Madison
+PIName: Claudia Solis-Lemus

projects/UWMadison_Weigel.yaml

@@ -0,0 +1,5 @@
+Description: Animal breeding and Genomics
+Department: Animal and Dairy Sciences
+FieldOfScience: Genomics
+Organization: University of Wisconsin-Madison
+PIName: Kent Weigel

projects/Vanderbilt_Paquet.yaml

@@ -0,0 +1,8 @@
+Description: >
+  study the quark-gluon plasma produced in collisions of nuclei. I perform relativistic hydrodynamic simulations of the collisions and 
+  study in particular the production of photons in the collisions. This is my Vanderbilt website: https://as.vanderbilt.edu/physics-astronomy/bio/jean-francois-paquet/
+  This is my professional website: https://j-f-paquet.github.io/ 
+Department: Department of Physics & Astronomy
+FieldOfScience: Physics
+Organization: Vanderbilt University
+PIName: Jean-Francois Paquet

projects/Washington_Savage.yaml

@@ -0,0 +1,9 @@
+Description: Quantum simulations of many-body systems for nuclear and high-energy physics (https://iqus.uw.edu).
+Department: IQuS, Department of Physics
+FieldOfScience: Physics
+Organization: University of Washington
+PIName: Martin J. Savage
+
+Sponsor:
+  CampusGrid:
+    Name: OSG Connect

projects/Webster_Suo.yaml

@@ -0,0 +1,8 @@
+Description: >
+  This work aims to construct a flexible scan system using multiple cameras 
+  that can correctly reconstruct 3D objects -- a human face with expression. The work 
+  proposed and used mathematical models to automate the 3D object reconstruction.
+Department: Computer and information science
+FieldOfScience: Computer Science
+Organization: Webster University
+PIName: Xiaoyuan Suo

projects/XENON.yaml → projects/xenon.yaml

@@ -1,4 +1,4 @@
-Department: Astrophysics
+Department: Physics
 Description: The XENON Dark Matter Experiment located at the Gran Sasso Laboratories
   (INFN, Italy), is currently the leader world project searching for the so called
   Dark Matter, something which is completely different from ordinary matter. This
@@ -8,16 +8,10 @@ Description: The XENON Dark Matter Experiment located at the Gran Sasso Laborato
   could reveal the nature of the DM looking at the possible interactions of the DM
   with ordinary matter, for instance with the Xenon, a noble gas been liquified at
   very low temperature. The study of the background signal, from the environment and
-  from the materials that make up the new detector containing the Xenon (which is
-  currently under construction and called XENON1T), is essential to understand the
-  detector's behavior and its implications on its performances. For this purpose an
-  extensive Montecarlo simulation and study is needed, and this require quite a lot
-  of CPU time. The MC simulation of the XENON experiment is based on the open source
-  codes called GEANT4 and ROOT.
+  from the materials that make up the new detector containing the Xenon, is essential
+  to understand the detector's behavior and its implications on its performances.
 FieldOfScience: Astrophysics
-ID: '15'
-Organization: Columbia University
-PIName: Alfio Rizzo
-Sponsor:
-  VirtualOrganization:
-    Name: OSG
+Organization: University of Chicago
+PIName: Luca Grandi
+
+