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Merge branch 'master' into SOFTWARE-5642-auto-gen-topology-ids
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mwestphall authored Sep 5, 2023
2 parents ce6e1f5 + cbb6ab3 commit fd44b22
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Showing 32 changed files with 721 additions and 38 deletions.
14 changes: 7 additions & 7 deletions .github/workflows/build-client-container.yml
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Expand Up @@ -19,7 +19,7 @@ jobs:
steps:
- name: make date tag
id: mkdatetag
run: echo "::set-output name=dtag::$(date +%Y%m%d-%H%M)"
run: echo "dtag=$(date +%Y%m%d-%H%M)" >> $GITHUB_OUTPUT

build:
runs-on: ubuntu-latest
Expand All @@ -29,7 +29,7 @@ jobs:
fail-fast: False

steps:
- uses: actions/checkout@v2
- uses: actions/checkout@v3

- name: Generate tag list
id: generate-tag-list
Expand All @@ -43,26 +43,26 @@ jobs:
tag_list+=($registry/$docker_repo:release-$TIMESTAMP)
done
IFS=,
echo "::set-output name=taglist::${tag_list[*]}"
echo "taglist=${tag_list[*]}" >> $GITHUB_OUTPUT
- name: Set up Docker Buildx
uses: docker/setup-buildx-action@v1
uses: docker/setup-buildx-action@v2.7.0

- name: Log in to Docker Hub
uses: docker/login-action@v1
uses: docker/login-action@v2.2.0
with:
username: ${{ secrets.DOCKER_USERNAME }}
password: ${{ secrets.DOCKER_PASSWORD }}

- name: Log in to OSG Harbor
uses: docker/login-action@v1
uses: docker/login-action@v2.2.0
with:
registry: hub.opensciencegrid.org
username: ${{ secrets.OSG_HARBOR_ROBOT_USER }}
password: ${{ secrets.OSG_HARBOR_ROBOT_PASSWORD }}

- name: Build and push Client Docker images
uses: docker/build-push-action@v2.2.0
uses: docker/build-push-action@v4
with:
push: true
tags: "${{ steps.generate-tag-list.outputs.taglist }}"
Expand Down
12 changes: 6 additions & 6 deletions .github/workflows/build-sw-container.yml
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Expand Up @@ -13,7 +13,7 @@ jobs:
runs-on: ubuntu-latest
if: startsWith(github.repository, 'opensciencegrid/')
steps:
- uses: actions/checkout@v2
- uses: actions/checkout@v3

- name: Generate tag list
id: generate-tag-list
Expand All @@ -28,26 +28,26 @@ jobs:
# This causes the tag_list array to be comma-separated below,
# which is required for build-push-action
IFS=,
echo "::set-output name=taglist::${tag_list[*]}"
echo "taglist=${tag_list[*]}" >> $GITHUB_OUTPUT
- name: Set up Docker Buildx
uses: docker/setup-buildx-action@v1
uses: docker/setup-buildx-action@v2.7.0

- name: Log in to Docker Hub
uses: docker/login-action@v1
uses: docker/login-action@v2.2.0
with:
username: ${{ secrets.DOCKER_USERNAME }}
password: ${{ secrets.DOCKER_PASSWORD }}

- name: Log in to OSG Harbor
uses: docker/login-action@v1
uses: docker/login-action@v2.2.0
with:
registry: hub.opensciencegrid.org
username: ${{ secrets.OSG_HARBOR_ROBOT_USER }}
password: ${{ secrets.OSG_HARBOR_ROBOT_PASSWORD }}

- name: Build and push Docker images
uses: docker/build-push-action@v2.2.0
uses: docker/build-push-action@v4
with:
context: .
push: true
Expand Down
4 changes: 2 additions & 2 deletions .github/workflows/validate-caches.yml
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Expand Up @@ -10,9 +10,9 @@ jobs:
if: startsWith(github.repository, 'opensciencegrid/')
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v2
- uses: actions/checkout@v3
- name: Set up Python
uses: actions/setup-python@v2
uses: actions/setup-python@v4
with:
python-version: 3.9.15
- name: Compare StashCache config lists
Expand Down
4 changes: 2 additions & 2 deletions .github/workflows/validate-code.yml
Original file line number Diff line number Diff line change
Expand Up @@ -6,9 +6,9 @@ jobs:
name: Validate Topology code
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v2
- uses: actions/checkout@v3
- name: Set up Python
uses: actions/setup-python@v2
uses: actions/setup-python@v4
with:
python-version: 3.9.15
- name: Install packages
Expand Down
4 changes: 2 additions & 2 deletions .github/workflows/validate-data.yml
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Expand Up @@ -7,9 +7,9 @@ jobs:
name: Validate Topology data
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v2
- uses: actions/checkout@v3
- name: Set up Python
uses: actions/setup-python@v2
uses: actions/setup-python@v4
with:
python-version: 3.9.15
- name: Install packages
Expand Down
16 changes: 16 additions & 0 deletions projects/Emory_Pesavento.yaml
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@@ -0,0 +1,16 @@
Department: Economics
Description: >
The goal of our research project is to develop a new technique to estimate
impulse response functions in Time-varying-parameters vector autoregressive models
(in short: TVP-VARs). TVP-VARs are particularly useful because, unlike traditional
VAR models, they accounts for changing economic conditions by allowing parameters
to change over time. Estimating impulse responses (one of the main tools in
macroeconomic analysis) in a TVP-VAR requires the implementation of Markov Chain
Montecarlo algorithms (such as Gibbs sampling). This is a computationally demanding
task in a TVP-VAR framework, due to the huge number of parameters to estimate.
However, we could substantially ease such task by using parallel computing
techniques. In this way, we could provide policy makers with a more realistic
and flexible framework use to perform macroeconomic policy evaluation."
FieldOfScience: Economics
Organization: Emory University
PIName: Elena Pesavento
9 changes: 9 additions & 0 deletions projects/Etown_Wittmeyer.yaml
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@@ -0,0 +1,9 @@
Description: I am interested in examining experience-dependent neuroplasticity and individual differences in humans as it pertains to learning and memory. In particular, I analyze structural magnetic resonance imaging (sMRI) data from various neuroimaging data-sharing platforms to explore changes in gray matter across learning and/or correlate learning performance with various cognitive and demographic factors.
Department: Psychology
FieldOfScience: Psychology and Life Sciences
Organization: Elizabethtown College
PIName: Jennifer Legault Wittmeyer

Sponsor:
CampusGrid:
Name: OSG Connect
9 changes: 9 additions & 0 deletions projects/FIU_Guo.yaml
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@@ -0,0 +1,9 @@
Description: >
My research in experimental nuclear physics requires large amounts of
simulations. These simulations are independent of one another and the OSPool is
very well suited for these tasks. Access to the OSG computing resources would be
a useful asset for my research.
Department: College of Arts and Science
FieldOfScience: Physics
Organization: Florida International University
PIName: Lei Guo
9 changes: 9 additions & 0 deletions projects/IIT_Zhong.yaml
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@@ -0,0 +1,9 @@
Description: We conduct research on scientific machine learning, especially related to how machine learning can be used to learn and understand dynamical systems from observation data. Right now, we are developing models to understand synchronization, i.e. how oscillators can be put in sync with spatial patterns.
Department: Appleid Mathematics
FieldOfScience: Appleid Mathematics
Organization: Illinois Institute of Technology
PIName: Ming Zhong

Sponsor:
CampusGrid:
Name: OSG Connect
9 changes: 9 additions & 0 deletions projects/NCSU_Gray.yaml
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@@ -0,0 +1,9 @@
Description: >
Map and characterize global change, and to understand the consequences of these changes for the Earth system and society.
Anthropogenic changes to vegetation (e.g. cropping systems, deforestation, etc.) are of particular interest.
Example research questions include: How can we feed a growing population without running out of water?
Have tropical deforestation mitigation policies been effective? How is vegetation phenology changing in response to a changing climate?
Department: Center for Geospatial Analytics
FieldOfScience: Geosciences
Organization: North Carolina State University
PIName: Josh Gray
7 changes: 7 additions & 0 deletions projects/NCSU_Staff.yaml
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@@ -0,0 +1,7 @@
Description: >
Continue my access to the OSPool after the OSG School to further
support potential users and workflows for NC State University
Department: Research Facilitation Service
FieldOfScience: Other
Organization: North Carolina State University
PIName: Christopher Blanton
9 changes: 9 additions & 0 deletions projects/NMSU_Lawson.yaml
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@@ -0,0 +1,9 @@
Description: >
I am requesting an OSPool project for my postdoctoral research investigating
drivers of population decline for the American Kestrel, a raptor species that breeds
across North America. I plan to use OSG resources to compile my environmental data
and fit statistical models.
Department: Fish, Wildlife, and Conservation Ecology
FieldOfScience: Ecological and Environmental Sciences
Organization: New Mexico State University
PIName: Abigail Lawson
5 changes: 5 additions & 0 deletions projects/UNL_Hebets.yaml
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@@ -0,0 +1,5 @@
Description: Assess spider web structure by training and tracking models using SLEAP
Department: Biological Sciences
FieldOfScience: Biological Sciences
Organization: University of Nebraska-Lincoln
PIName: Eileen Hebets
8 changes: 8 additions & 0 deletions projects/UTSA_Anantua.yaml
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@@ -0,0 +1,8 @@
Description: >
I am using Monte Carlo ray-tracing code GRMONTY to create and
compare two different emission models R-Beta and Critical-Beta
of M87 and Sgr A*. https://richardanantua.com/spectra/
Department: Department of Physics and Astronomy
FieldOfScience: Astronomy and Astrophysics
Organization: The University of Texas at San Antonio
PIName: Richard Anantua
8 changes: 8 additions & 0 deletions projects/Vanderbilt_Paquet.yaml
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@@ -0,0 +1,8 @@
Description: >
study the quark-gluon plasma produced in collisions of nuclei. I perform relativistic hydrodynamic simulations of the collisions and
study in particular the production of photons in the collisions. This is my Vanderbilt website: https://as.vanderbilt.edu/physics-astronomy/bio/jean-francois-paquet/
This is my professional website: https://j-f-paquet.github.io/
Department: Department of Physics & Astronomy
FieldOfScience: Physics
Organization: Vanderbilt University
PIName: Jean-Francois Paquet
17 changes: 17 additions & 0 deletions projects/xenon.yaml
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@@ -0,0 +1,17 @@
Department: Physics
Description: The XENON Dark Matter Experiment located at the Gran Sasso Laboratories
(INFN, Italy), is currently the leader world project searching for the so called
Dark Matter, something which is completely different from ordinary matter. This
Dark Matter is not (as the name hints) visible, but it should pervade the entire
Universe. Its presence has been confirmed by different experimental evidences, however
its intrinsic nature is one of the big puzzle of Modern Physics. The XENON Experiment
could reveal the nature of the DM looking at the possible interactions of the DM
with ordinary matter, for instance with the Xenon, a noble gas been liquified at
very low temperature. The study of the background signal, from the environment and
from the materials that make up the new detector containing the Xenon, is essential
to understand the detector's behavior and its implications on its performances.
FieldOfScience: Astrophysics
Organization: University of Chicago
PIName: Luca Grandi


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Expand Up @@ -1104,3 +1104,135 @@
Services:
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ResourceName: BNL_ATLAS_1
Services:
- CE
# ---------------------------------------------------------
- Class: SCHEDULED
ID: 1573603395
Description: HTCondor upgrade and dCache version upgrade
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