Repositories list

• CONCOCT-test-data

  Public
  A test dataset for CONCOCT

  1•0•2•0•Updated Mar 10, 2023Mar 10, 2023

• CONCOCT

  Public
  Clustering cONtigs with COverage and ComposiTion

  Python

  •

  Other

  •48•123•66•2•Updated Mar 6, 2020Mar 6, 2020

• integration_test_data

  Public
  Data used by continuous integration testing for CONCOCT

  0•0•0•0•Updated Jul 31, 2019Jul 31, 2019

• paper-data

  Public
  Assembly and other input data for 2014 paper

  0•0•1•0•Updated Oct 13, 2014Oct 13, 2014

• C-CONCOCT

  Public
  Multithreaded C implementation of a Gaussian mixture model designed to speed up the clustering stage of CONCOCT but applicable to any GMM clustering.

  C

  •1•1•0•0•Updated Dec 24, 2013Dec 24, 2013

• CorrelationBinning

  Public
  The experiments thought to optimize the contents of ProBin.

  Python

  •1•0•0•0•Updated Aug 5, 2013Aug 5, 2013

• ProBin

  Public
  A program for binning metagenomic contigs to taxonomic rank, with possibility to use correlation between multiple samples.

  Python

  •3•2•0•0•Updated Jun 28, 2013Jun 28, 2013