Repositories list

• chip_seq_regulons

  Public
  Jupyter Notebook

  •0•0•0•0•Updated Sep 29, 2024Sep 29, 2024

• recalibrate

  Public
  R package for gene expression fold change recalibration

  R

  •

  Apache License 2.0

  •0•1•0•0•Updated Apr 26, 2024Apr 26, 2024

• d2n_ms

  Public
  Dosage-to-network manuscript repo

  Jupyter Notebook

  •0•0•0•0•Updated Dec 10, 2023Dec 10, 2023

• lorals

  Public
  Python

  •7•32•7•1•Updated Apr 25, 2023Apr 25, 2023

• TF-eQTL

  Public
  HTML

  •1•1•0•0•Updated Feb 20, 2023Feb 20, 2023

• loseq

  Public
  R

  •0•0•0•0•Updated Dec 22, 2022Dec 22, 2022

• lorals_paper_code

  Public
  R

  •7•23•0•0•Updated May 8, 2022May 8, 2022

• covid-crispr-eqtl

  Public
  eQTLs for CRISPR screen hit genes and colocalization analysis with COVID-19 GWAS in the 3p21.31 locus

  R

  •

  Apache License 2.0

  •0•5•0•0•Updated Feb 3, 2022Feb 3, 2022

• containers

  Public
  Container images

  Shell

  •1•0•0•0•Updated Dec 14, 2021Dec 14, 2021

• dottools

  Public
  R

  •

  Other

  •0•0•0•0•Updated Dec 14, 2021Dec 14, 2021

• TF-eQTL_preprint

  Public
  R

  •0•2•0•0•Updated Jul 16, 2021Jul 16, 2021

• spiromics-covid19-eqtl

  Public
  Mapping of cis-eQTLs for COVID-19-related genes in the SPIROMICS dataset

  R

  •

  Apache License 2.0

  •0•5•0•0•Updated Apr 21, 2021Apr 21, 2021

• workflows

  Public
  Workflow description files for various pipelines

  WDL

  •0•0•0•0•Updated Jan 5, 2021Jan 5, 2021

• edityper

  Public
  Python

  •

  MIT License

  •1•1•0•0•Updated Jul 28, 2020Jul 28, 2020

• RNApipeline

  Public
  rna-seqrna-seq-pipelinepipeline

  Shell

  •1•8•0•0•Updated Sep 26, 2019Sep 26, 2019