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    10 repositories

    • sl_workshop_2024

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      Syllabus and activities for Pathogen Genomics Workshop at First International West Africa Symposium and Workshops on Infectious Disease, 2024.
      Creative Commons Attribution Share Alike 4.0 International
      •0•0•0•0•Updated Jul 20, 2024Jul 20, 2024

    • sl_pre-workshop_2024

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      Pre-workshop activities for Pathogen Genomics Workshop at First International West Africa Symposium and Workshops on Infectious Disease, 2024.
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      •0•0•0•0•Updated Jul 19, 2024Jul 19, 2024

    • rdv_resistance

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      This repository contains the scripts needed to generate the figures and analysis as reported in Ling Hu et al. 2024 (JCI Insight, accepted)
      Jupyter Notebook
      •1•0•0•0•Updated Jun 26, 2024Jun 26, 2024

    • aku_genomics_workshop_2024

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      Data and materials for Pathogen Genomics Workshop conducted at Aga Khan University, May 2024.
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      •0•2•0•0•Updated May 23, 2024May 23, 2024

    • molecular_epidemiology_covid19_chicago

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      This repository contains all the scripts used to generate all the figures and analysis as well as some of the sequence data presented in Ling Hu and Simons et. al 2024 (Cell Reports Medicine).
      Jupyter Notebook
      •1•0•0•0•Updated May 10, 2024May 10, 2024

    • symposium_workshop_2024

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      3rd Annual CPGME Pathogen Genomics Symposium Workshop
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      •1•0•0•0•Updated Apr 23, 2024Apr 23, 2024

    • dsfbr_activity_2024

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      In-class microbial genomics activity, DGP-485 Data Science for Biomedical Researchers, April 2024
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      •0•0•0•0•Updated Apr 10, 2024Apr 10, 2024

    • symposium_workshop_2023

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      Course Materials for Genomic Analysis Workshop for the 2nd Annual CPGME Pathogen Genomics Symposium
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      Creative Commons Attribution Share Alike 4.0 International
      •2•2•0•0•Updated Apr 25, 2023Apr 25, 2023

    • aku_genomics_workshop_2022

      Public
      Workshop materials
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      Creative Commons Attribution Share Alike 4.0 International
      •2•2•0•0•Updated Aug 5, 2022Aug 5, 2022

    • cpgme_genomics_workshop

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      Creative Commons Attribution Share Alike 4.0 International
      •0•0•0•0•Updated May 3, 2022May 3, 2022