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@OPIC-Oxford Oxford Particle Imaging Centre

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    7 repositories

    • localrec

      Public
      Localized reconstruction of flexible subunits from cryo-EM images
      Python
      •4•15•3•0•Updated Oct 19, 2020Oct 19, 2020

    • TomoPreprocess

      Public
      This set of scripts performs common preprocessing functions for tomographic tilt series data before further processing (eg with etomo)
      Python
      •0•1•0•0•Updated May 5, 2020May 5, 2020

    • PatchFinder

      Public
      This script extracts regular patches of particles from a Dynamo table of particles.
      M
      •0•0•0•0•Updated May 5, 2020May 5, 2020

    • relion-relax

      Public
      C++
      •
      GNU General Public License v2.0
      •0•1•0•0•Updated Jun 30, 2019Jun 30, 2019

    • scipion

      Public
      Scipion is an image processing framework to obtain 3D models of macromolecular complexes using Electron Microscopy (3DEM)
      C++
      •
      Other
      •47•0•4•0•Updated Sep 7, 2017Sep 7, 2017

    • pyrelion-scripts

      Public
      Scripts for Relion written in Python and using pyrelion class to parse STAR files
      Python
      •4•6•0•0•Updated Feb 13, 2017Feb 13, 2017

    • emed

      Public
      For masking out areas outside the holes on the EM grids, written in MATLAB
      Shell
      •
      MIT License
      •1•2•0•0•Updated Aug 25, 2016Aug 25, 2016