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    7 repositories

    • pseudogene_quantification

      Public
      Repo accompanying our manuscript on quantifying extra-nuclear inserts from population-level low-pass sequencing data
      bioinformaticsquantificationpseudogeneswolbachianumtsgenome-skimmingnupts
      Shell
      •
      GNU General Public License v3.0
      •0•4•0•0•Updated Jan 27, 2023Jan 27, 2023

    • vagrantDnaSim

      Public
      R
      •0•0•0•0•Updated Dec 5, 2022Dec 5, 2022

    • tangles

      Public
      tangle plots (of read mapping positions to circular assemblies)
      R
      •
      GNU General Public License v3.0
      •0•2•0•0•Updated Jun 28, 2019Jun 28, 2019

    • miRcounts

      Public
      Script to find the expression of miRNAs from raw sequence data
      Python
      •
      MIT License
      •0•0•0•0•Updated Oct 26, 2017Oct 26, 2017

    • autoclean

      Public
      set of scripts to clean raw NGS data
      Python
      •0•0•0•0•Updated Nov 28, 2015Nov 28, 2015

    • FvU

      Public
      Fused versus Unfused - Modelling the behaviour of chromosomal clines
      Python
      •
      GNU General Public License v2.0
      •0•0•0•0•Updated Jul 24, 2015Jul 24, 2015

    • Nichols89

      Public
      The fragmentation of tension zones in sparsely populated areas
      R
      •
      MIT License
      •0•0•0•0•Updated Jun 13, 2015Jun 13, 2015