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    10 repositories

    • mosaicatcher-pipeline-BIH

      Public
      Integrated workflow for SV calling from single-cell Strand-seq data
      Jupyter Notebook
      •
      MIT License
      •11•0•0•0•Updated Jan 16, 2025Jan 16, 2025

    • bih-alignment

      Public
      R
      •0•3•0•0•Updated Dec 19, 2024Dec 19, 2024

    • Awesome-Bioinformatics

      Public
      A curated list of awesome Bioinformatics libraries and software.
      622•0•0•0•Updated Feb 22, 2024Feb 22, 2024

    • Tri-Channel-Plots

      Public
      R functions for tri-channel plotting of single cell Strand-seq data.
      R
      •0•1•0•0•Updated Feb 16, 2024Feb 16, 2024

    • mosaicatcher-pipeline-BIH1

      Public
      Integrated workflow for SV calling from single-cell Strand-seq data
      Jupyter Notebook
      •
      MIT License
      •11•0•0•0•Updated Feb 14, 2024Feb 14, 2024

    • strand-seq-read-plots

      Public
      R
      •1•1•0•0•Updated Aug 23, 2023Aug 23, 2023

    • scNOVA

      Public
      scNOVA : Single-Cell Nucleosome Occupancy and genetic Variation Analysis
      R
      •
      MIT License
      •3•1•0•0•Updated Aug 18, 2023Aug 18, 2023

    • CNV-Callers-scRNAseq

      Public
      R
      •
      GNU General Public License v3.0
      •0•3•0•0•Updated Aug 15, 2023Aug 15, 2023

    • Sanders-Lab

      Public
      0•0•0•0•Updated May 31, 2023May 31, 2023

    • TranslocatoR

      Public
      Find translocations in Mosaicatcher-analyzed Strand-seq data.
      R
      •2•0•0•0•Updated Dec 14, 2022Dec 14, 2022