Repositories list

• AnaCore-utils

  Public
  Scripts for easily process NGS data from medical centers.

  Python

  •

  GNU General Public License v3.0

  •1•2•0•2•Updated Oct 24, 2024Oct 24, 2024

• snake-basket

  Public
  Customisable rules for snakemake.

  snakemake

  Python

  •

  GNU General Public License v3.0

  •0•2•0•0•Updated Sep 22, 2024Sep 22, 2024

• AnaCore

  Public
  Libraries for managing standard file formats and objects from NGS

  bioinformaticspython-library

  Python

  •

  GNU General Public License v3.0

  •2•4•0•1•Updated Jul 9, 2024Jul 9, 2024

• MInITI

  Public
  Detecting microsatellites instability by high throughput sequencing.

  machine-learningngsmsi

  HTML

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Jun 9, 2024Jun 9, 2024

• zfq

  Public
  FastQ file compressor.

  bioinformaticscompressionfastq

  Python

  •

  GNU General Public License v3.0

  •0•1•0•0•Updated Jan 30, 2024Jan 30, 2024

• miams

  Public
  Workflow for detecting microsatellite instability by next-generation sequencing on amplicons.

  JavaScript

  •1•2•1•0•Updated May 16, 2020May 16, 2020