Repositories list

• BiocSwirl_Intro_to_Stats

  Public
  contains BiocSwirl "Intro to Stats" course

  R

  •1•0•1•1•Updated Jun 6, 2022Jun 6, 2022

• BiocSwirl_Intro_to_Data_Science

  Public
  contains BiocSwirl Intro to Data Science course

  R

  •0•0•1•0•Updated May 16, 2022May 16, 2022

• BiocTerm

  Public
  A highly configurable, lightweight and feature rich terminal interface with multi-language support for conducting bioinformatics. This project was the People's Choice Award for the Vancouver Bioinformatics Hackathon Hackseq2019.

  Go

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  Apache License 2.0

  •1•3•7•0•Updated May 15, 2022May 15, 2022

• learning_resources

  Public
  Workshop Materials and Learning Resources for BiocSwirl and BiocTerm

  HTML

  •0•1•0•0•Updated May 15, 2022May 15, 2022

• BiocSwirl_scRNAseq

  Public
  contains BiocSwirl course covering the analysis of single cell RNAseq datasets

  R

  •0•0•0•0•Updated Feb 13, 2022Feb 13, 2022

• automated_testing

  Public
  Sandbox repo for developing docker images, unit tests, and workflow files for automated integration pipeline

  0•0•6•1•Updated Aug 15, 2021Aug 15, 2021

• Creating-Rmarkdown-courses-to-teach-bioinformatic-analysis-pipelines

  Public
  MIT License

  •2•1•0•0•Updated Aug 12, 2021Aug 12, 2021

• BiocSwirl

  Public
  BiocSwirl is a series of in-depth swirlify generated courses used to teach bioinformatics workflows in R/Bioconductor using an interactive and easy to digest format. This project was the People's Choice Award for the Vancouver Bioinformatics Hackathon Hackseq2019.

  R

  •3•30•2•0•Updated Apr 4, 2021Apr 4, 2021

• BiocSwirl_RNAseq

  Public
  contains BiocSwirl course covering the analysis of bulk RNAseq datasets

  HTML

  •0•1•0•0•Updated Mar 11, 2021Mar 11, 2021

• Templates

  Public
  Templates for bioctools developers using git, R resources, and others

  0•0•1•0•Updated Feb 12, 2021Feb 12, 2021

• bioinformaticstutorials.github.io

  Public
  HTML

  •1•0•0•0•Updated Feb 11, 2021Feb 11, 2021

• biocswirl-dev-team.github.io

  Public
  HTML/Website Repository for the BiocTools Projects

  CSS

  •0•0•0•0•Updated Jan 16, 2021Jan 16, 2021

• BiocSwirl_ChIPseq

  Public
  contains the BiocSwirl course covering analysis of ChIPseq datasets

  R

  •0•0•0•0•Updated Dec 29, 2020Dec 29, 2020

• CSHL-BiocSwirl

  Public
  Go

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  MIT License

  •1•0•0•0•Updated Nov 8, 2020Nov 8, 2020

• project-website-template

  Public
  A HTML/CSS Template for Building Projects or Personal Websites

  HTML

  •

  BSD 2-Clause "Simplified" License

  •562•0•0•0•Updated Oct 15, 2020Oct 15, 2020

• MBB343

  Public
  Data Science Laboratory for MBB – Undergraduate Course for SFU

  R

  •1•0•0•0•Updated Sep 10, 2020Sep 10, 2020

• Hackseq2019

  Public
  Repository for the original hackseq 2019 code (Do not fork/clone!)

  R

  •0•0•0•0•Updated Dec 22, 2019Dec 22, 2019

• biovim

  Public
  An out of the box vim config that includes various plugins to aid in the conduction of bioinformatics.

  Shell

  •0•0•1•0•Updated Oct 20, 2019Oct 20, 2019

• biocterm_tmux_plugin

  Public
  custom plugin for biocterm's tmux configuration

  Shell

  •0•0•1•0•Updated Oct 19, 2019Oct 19, 2019