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@biodiversitydata-se Swedish Biodiversity Data Infrastructure

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    65 repositories

    • mol-mod

      Public
      Module for sequence-based occurrence data in Biodiversity Atlas Sweden.
      Python
      •
      Creative Commons Zero v1.0 Universal
      •1•4•0•0•Updated Nov 4, 2024Nov 4, 2024

    • asvoccur

      Public
      Tools for ASV occurrence data in SBDI
      R
      •
      Other
      •0•1•0•0•Updated Nov 4, 2024Nov 4, 2024

    • api-docs

      Public
      SBDI API Documentation
      HTML
      •0•0•0•0•Updated Nov 4, 2024Nov 4, 2024

    • biologging-sensor-client

      Public
      SBDI Biologging Sensor project - Client
      TypeScript
      •
      GNU General Public License v3.0
      •0•2•6•0•Updated Nov 4, 2024Nov 4, 2024

    • base-branding

      Public
      Base LA header, banner, footer branding and index for new Living Atlas deployments
      CSS
      •
      Other
      •9•0•0•0•Updated Nov 1, 2024Nov 1, 2024

    • pipelines

      Public
      Pipelines for data processing (GBIF and LivingAtlases)
      Java
      •
      Apache License 2.0
      •28•0•1•0•Updated Nov 1, 2024Nov 1, 2024

    • bie-index

      Public
      Taxonomic search services
      Groovy
      •
      Other
      •17•0•1•0•Updated Nov 1, 2024Nov 1, 2024

    • image-service

      Public
      Image repository and tiling services
      Groovy
      •17•0•1•1•Updated Oct 30, 2024Oct 30, 2024

    • ala-bie-hub

      Public
      BIE (Biodiversity Information Explorer) hub - merge of old ala-bie and bie-plugin
      Groovy
      •
      Mozilla Public License 2.0
      •6•0•1•0•Updated Oct 30, 2024Oct 30, 2024

    • biologging-sensor-datamodel

      Public
      Datamodel documentation of the Biologging sensor project
      0•1•0•0•Updated Oct 25, 2024Oct 25, 2024

    • collectory

      Public
      Metadata registry for the Atlas
      Groovy
      •
      Other
      •15•0•1•0•Updated Oct 22, 2024Oct 22, 2024

    • data-quality-filter-service

      Public
      Groovy
      •2•0•0•0•Updated Oct 18, 2024Oct 18, 2024

    • SOS

      Public
      Species Observation System (SOS)
      C#
      •
      European Union Public License 1.2
      •1•11•3•1•Updated Oct 16, 2024Oct 16, 2024

    • bie-solr

      Public
      Dockerized solr instance used by bie-index
      Shell
      •0•0•0•0•Updated Oct 11, 2024Oct 11, 2024

    • ala-sensitive-data-service

      Public
      Sensitive data service suitable for use with the pipelines project
      Java
      •
      Other
      •4•0•0•0•Updated Oct 11, 2024Oct 11, 2024

    • ala-namematching-service

      Public
      Service for ALA name matching to aid pipelines integration
      Java
      •
      Other
      •4•0•0•0•Updated Oct 11, 2024Oct 11, 2024

    • ala-cas-5

      Public
      ALA CAS 5 implementation
      Kotlin
      •
      Apache License 2.0
      •11•0•5•0•Updated Oct 11, 2024Oct 11, 2024

    • apikey

      Public
      Administration and validation of app to app API keys
      Groovy
      •
      Other
      •8•0•1•0•Updated Oct 11, 2024Oct 11, 2024

    • spatial-hub

      Public
      New spatial portal front end using AngularJS
      JavaScript
      •16•0•3•0•Updated Oct 11, 2024Oct 11, 2024

    • logger-service

      Public
      Atlas event logging
      Groovy
      •8•0•1•0•Updated Oct 11, 2024Oct 11, 2024

    • sds-webapp2

      Public
      Sensitive Data Service webapp
      CSS
      •9•0•1•0•Updated Oct 10, 2024Oct 10, 2024

    • regions

      Public
      Regions front end web application
      Groovy
      •16•0•2•0•Updated Oct 10, 2024Oct 10, 2024

    • dashboard

      Public
      SBDI Dashboard
      Groovy
      •13•0•1•0•Updated Oct 10, 2024Oct 10, 2024

    • specieslist-webapp

      Public
      Species lists and traits tool
      Groovy
      •
      Mozilla Public License 2.0
      •21•0•2•0•Updated Oct 10, 2024Oct 10, 2024

    • biocache-service

      Public
      Occurrence & mapping webservices
      Java
      •
      Other
      •26•0•1•0•Updated Oct 7, 2024Oct 7, 2024

    • documentation-overview

      Public
      Documentation starting point
      0•0•0•0•Updated Oct 2, 2024Oct 2, 2024

    • gbif-taxonomy-for-la

      Public
      Utilities to adapt the GBIF Backbone Taxonomy for it usage by LA portals
      JavaScript
      •
      Mozilla Public License 2.0
      •1•0•0•0•Updated Sep 17, 2024Sep 17, 2024

    • repo-overview

      Public
      Overview of SBDI-related repos
      0•0•0•0•Updated Sep 9, 2024Sep 9, 2024

    • coidb

      Public
      A small python package for downloading and processing metabarcoding references
      Python
      •
      MIT License
      •1•2•2•0•Updated Aug 31, 2024Aug 31, 2024

    • biocollect

      Public
      Biocollect front end application for Bioatlas
      Groovy
      •
      Other
      •15•0•29•0•Updated Aug 30, 2024Aug 30, 2024