Repositories list

• Promoter-proximal-RNA-pol-II-termination-regulates-transcription-during-human-cell-transition-2024

  Public
  Scripts for the analysis presented in the article : Promoter-proximal RNA polymerase II termination regulates transcription during human cell type transition

  R

  •0•0•0•0•Updated Feb 10, 2025Feb 10, 2025

• intragenic_drop-off

  Public
  Scripts and associated data for the drop-off probability estimation analysis in the article : FACT maintains chromatin architecture and thereby stimulates RNA polymerase II pausing during transcription in vivo

  R

  •0•0•0•0•Updated Jul 23, 2024Jul 23, 2024

• warp

  Public
  C#

  •

  GNU General Public License v3.0

  •16•54•31•6•Updated May 14, 2024May 14, 2024

• WGANReconstruction

  Public
  C#

  •0•3•0•0•Updated Oct 31, 2022Oct 31, 2022

• FlexibleRefinement

  Public
  C++

  •0•3•0•0•Updated Oct 31, 2022Oct 31, 2022

• Efficient-RNA-polymerase-II-pause-release-requires-U2-snRNP-function_2021

  Public
  Caizzi, Monteiro-Martins (2021)

  R

  •2•6•1•0•Updated Nov 16, 2021Nov 16, 2021

• RdRp-DimerDetection

  Public
  C#

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Jun 29, 2021Jun 29, 2021

• boxnet

  Public
  BoxNet implemented in TensorFlow and all current training data

  Python

  •

  GNU General Public License v3.0

  •6•31•1•0•Updated Apr 25, 2019Apr 25, 2019

• noisenet2d

  Public
  2D micrograph denoising based on the noise2noise paper

  Python

  •

  GNU General Public License v3.0

  •1•4•0•0•Updated Mar 26, 2019Mar 26, 2019

• warpcraft

  Public
  C#

  •3•4•4•0•Updated Sep 3, 2017Sep 3, 2017