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MeSS
PublicSnakemake pipeline for simulating shotgun metagenomic sampleszAMP
Publicassembly_finder
Publicbioconda-recipes
PubliczAMPExplorer
PublicMeSS-figures
Publicphanta
Publicdiag_pipelines
PublicPipelines dealing with high throughput sequencing data for microbiology diagnostic procedures. Documentation available at http://metagenlabdiag-pipelines.readthedocs.io/en/latest/ and Docker images at https://hub.docker.com/r/metagenlab/diag_pipelines/.configs
PublicGENCOV
Publicbenchmark-MeSS-CAMISIM
PubliczDB
Publiclocus2genoplotr
Publicchlamdb
PublicMASRES
Publicmetagenlab_libs
Publicrnaseq
Publicmummer2circos
Publicextractmag
Publicnanopore
PublicBioVx
PublicTPutils
Publiccore_genome_phylogeny
PublicMGE_identifier
Publicupdated_simulate_PCR
PublicCorrected version of simulate_PCR (https://doi.org/10.1186/1471-2105-15-237)blast2profile
PublicMultiQC
Public