Open Problems in Single-Cell Analysis
30 packages
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data_processors/dataset_simulatorPublished
Oct 28, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_spatial_decomposition14 -
methods/harmonypyPublished
Sep 24, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration14 -
grn_methods/celloraclePublished
Aug 3, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_grn_inference14 -
grn_methods/ppcorPublished
Aug 29, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_grn_inference11 -
grn_methods/scgptPublished
Sep 9, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_grn_inference8 -
grn_methods/graniePublished
Aug 16, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_grn_inference7 -
perturbation/sc_countsPublished
Aug 3, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_grn_inference7 -
control_methods/mean_across_celltypesPublished
Jun 4, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_perturbation_prediction6 -
control_methods/ground_truthPublished
Jun 4, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_perturbation_prediction6 -
methods/lgc_ensemble_preparePublished
Jun 4, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_perturbation_prediction6 -
control_methods/mean_across_compoundsPublished
Jun 4, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_perturbation_prediction6 -
methods/nn_retraining_with_pseudolabelsPublished
Jun 4, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_perturbation_prediction6 -
methods/pyboostPublished
Jun 4, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_perturbation_prediction6 -
methods/scapePublished
Jun 4, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_perturbation_prediction6 -
methods/transformer_ensemblePublished
Jun 4, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_perturbation_prediction6 -
methods/jn_ap_op2Published
Jun 4, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_perturbation_prediction6 -
control_methods/zerosPublished
Jun 4, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_perturbation_prediction6 -
control_methods/samplePublished
Jun 4, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_perturbation_prediction6 -
control_methods/mean_outcomePublished
Jun 4, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_perturbation_prediction6 -
methods/lgc_ensemble_predictPublished
Jun 4, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_perturbation_prediction6 -
process_dataset/generate_id_mapPublished
Jun 4, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_perturbation_prediction6 -
grn_methods/scenicPublished
Sep 14, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_grn_inference6 -
grn_methods/genie3Published
Aug 29, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_grn_inference5