working on looking at config file. this refs #76

src/hyperctui/autonomous_reconstruction/event_handler.py

@@ -9,11 +9,12 @@
 from hyperctui import interact_me_style, normal_style, error_style, label_in_focus_style
 
 from hyperctui.session import SessionKeys
-from hyperctui.utilities.get import Get
 
+from hyperctui.utilities.get import Get
 from hyperctui.utilities.status_message_config import StatusMessageStatus, show_status_message
 from hyperctui.utilities.table import TableHandler
 from hyperctui.utilities.array import formatting_list_for_print
+from hyperctui.utilities.config_handler import ConfigHandler
 
 from hyperctui.preview_file.preview_file_launcher import PreviewFileLauncher, PreviewMetadataFileLauncher, \
     PreviewImageLauncher
@@ -374,10 +375,22 @@ def checking_state_of_projections_table(self):
                                                  qcolor=background_color)
                     row_index += 1
 
-    def refrech_reconstruction_table_clicked(self):
+    def refresh_reconstruction_table_clicked(self):
         """this is where we will check the json file in {{location TBD}} and look for tag that
         list the reconstruction done!"""
-        pass
+        logging.info("User is refreshing the autonomous reconstruction table.")
+
+        folder_path = self.parent.folder_path
+        reconstruction_config = folder_path.reconstruction_config
+        if not os.path.exists(reconstruction_config):
+            logging.info(f"- config file {reconstruction_config} not found!")
+            return
+
+        logging.info(f"- config file {reconstruction_config} has been located!")
+        o_config = ConfigHandler(parent=self.parent)
+        o_config.load_reconstruction_config()
+
+
 
 
 

src/hyperctui/hyperctui.py

@@ -40,6 +40,7 @@
 class HyperCTui(QMainWindow):
     log_id = None  # UI id of the logger
     config = None  # config dictionary
+    reconstruction_config = None  # config of the
 
     log_buffer_size = 500  #  500 lines
 
@@ -478,7 +479,7 @@ def autonomous_refresh_table_clicked(self):
 
     def autonomous_checking_reconstruction_clicked(self):
         o_event = AutonomousReconstructionHandler(parent=self)
-        o_event.refrech_reconstruction_table_clicked()
+        o_event.refresh_reconstruction_table_clicked()
 
     # leaving ui
     def closeEvent(self, c):

src/hyperctui/utilities/config_handler.py

@@ -29,3 +29,12 @@ def load(self):
                             level=logging.INFO)
         logging.info("*** Starting a new session ***")
         logging.info(f" Version: {versioneer.get_version()}")
+
+    def load_reconstruction_config(self, file_name=None):
+        if not os.path.exists(file_name):
+            return
+
+        with open(file_name) as f:
+            config = json.load(f)
+
+        self.parent.reconstruction_config = config

src/hyperctui/utilities/folder_path.py

@@ -3,6 +3,8 @@
 from hyperctui.parent import Parent
 from hyperctui.session import SessionKeys
 
+RECONSTRUCTION_CONFIG = "reconstruction_config.json"
+
 
 class FolderPath(Parent):
     """
@@ -19,6 +21,7 @@ class FolderPath(Parent):
     nexus = None
     mcp_raw = None
     recon = None
+    reconstruction_config = None  # json file created/updated by Shimin's code
 
     def update(self):
 
@@ -42,12 +45,18 @@ def update(self):
         self.mcp()
         self.recon(title=title)
         self.create_mcp_raw()
+        self.svmbir_config(title=title)
 
     def __repr__(self):
         return f"folder_path:\n" + \
-            f"- shared:  \t\t{self.shared}\n- autoreduce:  \t{self.autoreduce}" + \
-            f"\n- mcp:  \t\t\t{self.mcp}\n- reduction_log: {self.reduction_log}\n- nexus:  \t\t{self.nexus}" + \
-            f"\n- mcp_raw:  \t\t{self.mcp_raw}\n- recon:  \t\t{self.recon}"
+            f"- shared:  \t\t{self.shared}\n" \
+            f"- autoreduce:  \t{self.autoreduce}\n" + \
+            f"- mcp:  \t\t{self.mcp}\n" \
+            f"- reduction_log:{self.reduction_log}\n" \
+            f"- nexus:  \t\t{self.nexus}\n" + \
+            f"- mcp_raw:  \t{self.mcp_raw}\n" \
+            f"- recon:  \t\t{self.recon}\n" \
+            f"- reconstruction_config: {self.reconstruction_config}\n"
 
     def shared(self):
         self.shared = os.sep.join([self.ipts_full_path, "shared"])
@@ -74,3 +83,6 @@ def create_mcp_raw(self):
         self.mcp_raw = os.sep.join([self.ipts_full_path,
                                     'images',
                                     'mcp'])
+
+    def svmbir_config(self, title=None):
+        self.reconstruction_config = os.sep.join([self.shared, "insitu_recon", title, RECONSTRUCTION_CONFIG])