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Merge pull request #63 from andrewGhazi/devel
test-coverage #219: Commit afdb69e pushed by lambdamoses
January 29, 2025 18:41 16m 0s devel
January 29, 2025 18:41 16m 0s
quickly compute add_geo with data.table instead of bplapply
test-coverage #218: Pull request #63 opened by andrewGhazi
January 28, 2025 19:56 15m 26s andrewGhazi:devel
January 28, 2025 19:56 15m 26s
Terra update
test-coverage #217: Commit 8f09582 pushed by lambdamoses
January 28, 2025 19:20 19m 44s devel
January 28, 2025 19:20 19m 44s
Don't match integer64 cell IDs #60
test-coverage #216: Commit 9772ae5 pushed by lambdamoses
January 25, 2025 05:27 17m 55s devel
January 25, 2025 05:27 17m 55s
Terra update problems and get rid of warning from cropping
test-coverage #215: Commit edab6fd pushed by lambdamoses
January 21, 2025 20:30 45m 15s devel
January 21, 2025 20:30 45m 15s
Pass sample_id to constructor in readCosMX, closing #61
test-coverage #214: Commit 2169a8b pushed by lambdamoses
January 7, 2025 17:51 15m 29s devel
January 7, 2025 17:51 15m 29s
Pass BPPARAM and sparse arguments from aggregateTxTech to aggregateTx
test-coverage #213: Commit 7c22fb7 pushed by lambdamoses
January 3, 2025 20:11 15m 19s devel
January 3, 2025 20:11 15m 19s
Updated documentation
test-coverage #212: Commit 619a6ca pushed by lambdamoses
January 3, 2025 18:17 14m 50s devel
January 3, 2025 18:17 14m 50s
Deal with empty geometries in txSpots
test-coverage #211: Commit c5977e3 pushed by lambdamoses
January 3, 2025 18:14 16m 2s devel
January 3, 2025 18:14 16m 2s
Reimplemented aggregation by transcript spots
test-coverage #210: Commit 1559fb7 pushed by lambdamoses
January 3, 2025 16:14 16m 50s devel
January 3, 2025 16:14 16m 50s
Merge branch 'main' into devel
test-coverage #209: Commit 761c859 pushed by lambdamoses
January 2, 2025 02:57 41m 57s devel
January 2, 2025 02:57 41m 57s
Version bump for fix
test-coverage #208: Commit 0803d83 pushed by lambdamoses
December 19, 2024 22:29 43m 28s devel
December 19, 2024 22:29 43m 28s
New version of terra undid the flip thing
test-coverage #207: Commit febca98 pushed by lambdamoses
December 14, 2024 03:14 41m 52s devel
December 14, 2024 03:14 41m 52s
Test aggregating SFE with sf data frames and when some cells are not …
test-coverage #206: Commit 6e4508d pushed by lambdamoses
November 23, 2024 00:06 16m 28s devel
November 23, 2024 00:06 16m 28s
Drop graph when only 1 cell is left in sample as the graph is meaning…
test-coverage #205: Commit be522f7 pushed by lambdamoses
November 20, 2024 21:28 14m 19s devel
November 20, 2024 21:28 14m 19s
Updated collate and documentation
test-coverage #204: Commit 65f5b8e pushed by lambdamoses
November 20, 2024 04:14 16m 11s devel
November 20, 2024 04:14 16m 11s
Bring back graph reconstruction and introduced the option SFE_graph_s…
test-coverage #203: Commit f1f52ab pushed by lambdamoses
November 20, 2024 04:10 2m 45s devel
November 20, 2024 04:10 2m 45s
Put zero.policy in attr in knn and dnn bioc method
test-coverage #202: Commit 5dfad23 pushed by lambdamoses
November 20, 2024 02:38 15m 10s devel
November 20, 2024 02:38 15m 10s
Updated the part about graphs in the vignette
test-coverage #201: Commit bed1a60 pushed by lambdamoses
November 19, 2024 03:13 16m 36s devel
November 19, 2024 03:13 16m 36s
Merge branch 'devel' of https://github.com/pachterlab/SpatialFeatureE…
test-coverage #200: Commit cb2aeea pushed by lambdamoses
November 19, 2024 01:43 17m 11s devel
November 19, 2024 01:43 17m 11s
Merge branch 'devel' of https://github.com/pachterlab/SpatialFeatureE…
test-coverage #199: Commit 954172f pushed by alikhuseynov
November 18, 2024 13:59 17m 27s devel
November 18, 2024 13:59 17m 27s
Make Visium HD graph
test-coverage #198: Commit fece636 pushed by lambdamoses
November 16, 2024 02:48 14m 44s devel
November 16, 2024 02:48 14m 44s
Deal with directory names that contain digits
test-coverage #197: Commit ecbe7b9 pushed by lambdamoses
November 14, 2024 16:39 14m 18s devel
November 14, 2024 16:39 14m 18s
Don't check length of x and y
test-coverage #196: Commit 33fd1f7 pushed by lambdamoses
November 13, 2024 21:45 15m 38s devel
November 13, 2024 21:45 15m 38s
Allow swapping y and x in st_any_pred
test-coverage #195: Commit e03a36d pushed by lambdamoses
November 13, 2024 20:53 18m 6s devel
November 13, 2024 20:53 18m 6s