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Merge branch 'documentation' of github.com:pachterlab/voyager into do…
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lambdamoses committed May 16, 2024
2 parents 07ab67e + cef43c9 commit 57e8128
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98 changes: 49 additions & 49 deletions vignettes/bivariate.ipynb

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93 changes: 47 additions & 46 deletions vignettes/create_sfe.ipynb

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36 changes: 18 additions & 18 deletions vignettes/create_sfe_v2.ipynb
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"---\n",
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"## Downloading the data\n",
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"Here, spot locations are provided as a CSV file. There are two columns of particular interest, namely `xcoord` and `ycoord`. The barcode column corresponds to the barcodes in the count matrix. Before calling the `SpatialFeatureExperiment` constructor, the spatial coordinates must be converted to a `sf` data frame using `df2sf()`. The coordinates are centroid positions, so we will indicate that `geometryType=\"POINT\"`. "
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