ETL for Nutrition report register for 407A and 407B #486
Conversation
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
njorocs
requested changes
Nov 26, 2024
| e.encounter_id as encounter_id, | ||
| e.creator, | ||
| e.date_created as date_created, | ||
| max(if(o.concept_id=164181,trim(o.value_coded),null)) as visit_type, |
There was a problem hiding this comment.
remove all trim() from value_coded
| e.creator, | ||
| e.date_created as date_created, | ||
| max(if(o.concept_id=164181,trim(o.value_coded),null)) as visit_type, | ||
| max(if(o.concept_id=160632,trim(o.value_text),null)) as facility_name, |
There was a problem hiding this comment.
Use a more intuitive variable/column name. Which facility name is this?
| e.date_created as date_created, | ||
| max(if(o.concept_id=164181,trim(o.value_coded),null)) as visit_type, | ||
| max(if(o.concept_id=160632,trim(o.value_text),null)) as facility_name, | ||
| max(if(o.concept_id=5272,trim(o.value_coded),null)) as patient_pregnant, |
| max(if(o.concept_id=160632,trim(o.value_text),null)) as medication_condition_other, | ||
| max(if(o.concept_id=163894,trim(o.value_coded),null)) as patient_has_edema, | ||
| max(if(o.concept_id=156625,trim(o.value_coded),null)) as anaemia_level, | ||
| max(if(o.concept_id=163304,trim(o.value_coded),null)) as metabolic_disorders, |
There was a problem hiding this comment.
This being a multi-select, how do you handle multiple disorders?
| max(if(o.concept_id=156625,trim(o.value_coded),null)) as anaemia_level, | ||
| max(if(o.concept_id=163304,trim(o.value_coded),null)) as metabolic_disorders, | ||
| max(if(o.concept_id=160205,trim(o.value_coded),null)) as patient_sam_mam, | ||
| max(if(o.concept_id=162696,trim(o.value_coded),null)) as nutritional_intervention, |
There was a problem hiding this comment.
This column name is not matching the question on the form.
| max(if(o.concept_id=168734,trim(o.value_coded),null)) as postnatal, | ||
| max(if(o.concept_id=163300,trim(o.value_coded),null)) as maternal_nutrition, | ||
| max(if(o.concept_id=161005,trim(o.value_coded),null)) as critical_nutrition_practices, | ||
| max(if(o.concept_id=161648,trim(o.value_coded),null)) as therapeutic_food, |
There was a problem hiding this comment.
Handle possible multiple values
| max(if(o.concept_id=161005,trim(o.value_coded),null)) as critical_nutrition_practices, | ||
| max(if(o.concept_id=161648,trim(o.value_coded),null)) as therapeutic_food, | ||
| max(if(o.concept_id=160632,trim(o.value_text),null)) as therapeutic_food_other, | ||
| max(if(o.concept_id=159854,trim(o.value_coded),null)) as supplemental_food, |
There was a problem hiding this comment.
Handle possible multiple values
| max(if(o.concept_id=160632,trim(o.value_text),null)) as therapeutic_food_other, | ||
| max(if(o.concept_id=159854,trim(o.value_coded),null)) as supplemental_food, | ||
| max(if(o.concept_id=160632,trim(o.value_text),null)) as supplemental_food_other, | ||
| max(if(o.concept_id=5484,trim(o.value_coded),null)) as micronutrients, |
There was a problem hiding this comment.
Handle possible multiple values
| max(if(o.concept_id=1788,trim(o.value_coded),null)) as referral_status, | ||
| max(if(o.concept_id=167381,trim(o.value_coded),null)) as criteria_for_admission, | ||
| max(if(o.concept_id=162477,trim(o.value_coded),null)) as type_of_admission, | ||
| max(if(o.concept_id=5096,o.value_datetime,null)) as next_appointment_date, |
There was a problem hiding this comment.
This is handled by appointment module. check on the form. You need to make sure the service is included in the appointment etl.
| max(if(o.concept_id=5096,o.value_datetime,null)) as next_appointment_date, | ||
| max(if(o.concept_id=5619,trim(o.value_coded),null)) as cadre, | ||
| max(if(o.concept_id=160632,trim(o.value_text),null)) as cadre_other, | ||
| max(if(o.concept_id=1473,o.value_text,null)) as provider_name, |
There was a problem hiding this comment.
How does this work? Is this concept/variable in the form?
gabriel090
force-pushed
the
nutrition
branch
from
5ccc8c9 to
53c4f1e
Compare
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
No description provided.