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Merge pull request #414 from pangenome/update_stuff
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update odgi/smoothxg
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AndreaGuarracino authored Sep 28, 2024
2 parents 1e6fd38 + cdcd1a6 commit e8dd3fd
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2 changes: 1 addition & 1 deletion Dockerfile
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Expand Up @@ -73,7 +73,7 @@ RUN git clone --recursive https://github.com/ekg/seqwish \
RUN git clone --recursive https://github.com/pangenome/smoothxg \
&& cd smoothxg \
&& git pull \
&& git checkout 986b11fd33b95200f476769df50d2e1cd4c070d8 \
&& git checkout 66b17aeead7980f517fed8cc9002bdb2e86a0572 \
&& git submodule update --init --recursive \
&& sed -i 's/-msse4.1/-march=sandybridge -Ofast/g' deps/spoa/CMakeLists.txt \
&& sed -i 's/-march=native/-march=sandybridge -Ofast/g' deps/spoa/CMakeLists.txt \
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